Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0024 ATGCACCAGGTACCAATCTTTCTCCTCGTCCTACACTTCCTCTTCCATTCCACAAGTGGGTTTGGAACCATGGGACCAATCTCTGCTTCATTCGGCAAAGACGAGTTCTTCTGCGCCATCGATGCTGGTGGCAACCAAGAAGTTATATGCTTCGGAAAAAACACAACTTTGCAAAACCCATCACAACCCACTTCCCCTTCTTCTTCTCCTTCTTCATTACCTTACTTCACAAACGTTCCTGCCATGTCAGCACTTTCTGGGGGCGCAGGTTTTCTCTGCGGCATTTTAGCGAACACCTCACAAGCTTTCTGCTGGGGCCCCGGAAAATCCGCCGGAGACGCCGTTCTTGTGCCGCCGGCGTACCGTAACATCCCCTACTCGCGTATCGCAGCAGGGAAGTCCCACGTCTGCGCAATCAGAGGCTCCTACTTCTCCGATCGAGCTTCAGGAACCGTTGATTGCTGGGAAATCGCTCAAAAGCGGAATAACACGTTTTCCGCCAAACAGAGCCTTACGTTCTACGACCCGTCAGTTAGCAATCTCGAGCTGAACGACGTAGTTTCCGGGGATGGCTTCTCATGCGGTGGCGTCAGGGATGGAGGTCTCATTTGTTGGGGACCAAATTCGAAGGATTTGGGCGTTTCCAACGTTTCTGAGAGCTTCTCGGTTTTGGCGTCGGGGAAAAGCGCGTTTTGCGGCGTTTCGAACTCCTCCGGGGACTTGAAATGTTGGGGTGACCCGAATTCGTATTCAGATCCTCCACCGGGCCAGGTTCAGTTGGTTTCGCTCTCTGCTAGTGCTAGCCATTTTTGTGGGATCAGAAAAGATAACCATGTTGTGGAGTGTTGGGGTAGTTTTGACCCTTCAGTTGTTCCAAAAGGTTATGGCTTTATGGCTATTGCTTCCTCTGATTACACTACCTGTGGGATCAGGGAAGATGATCTTTTACTTGATTGTTGGGCGGTGAACAATGTTTCTTCATCAAAGCCTAGTTTTGACCCTCCTTTGGAGCTTTCTAGCCCTGGTCTTTGTAGAGCTGGTCCTTGTGGACCTGATGAGTTTGCTTTCAATGTTAGTGTGTTGAATGAGCCTGATTTGACTAGCTTGTGTGTTAGGCAAGATTTGAGGATTTGTTCCCCTTGTGGGTCTAATTGCTCTCAAGGCCTTTTCCTTTCTAGCCCTTGTGGTTTGAACAAGGATAGGGTGTGCACTGCTTGTTCTCTTTGTCAGAATAGCTCTTGTTGGGGTGTTTGTGGGATTCACCCAACTGCAGGTTTGCACCTGCACCATTTGCTTAGGTGGGTACTCATAGCTGGGTCTTCTGGTTTGGGTTTCTTGATGATTTTGGCTTGTGGATGTGTTGTCAAGAGGAGGGGGAATAAAGGTGCAAAGAAACAATCAAAGTCTTGTATGGGGAAAATGGAGCACGAGGATAATGATATGAATGTTGTTGGTCTTAATTCTACTCCTTCTGTTGCTTCATGTCCCGGAGTGCCTCAGGTTTTTAGGCTTTCTGAGTTGAAAGATGCTACTAATGGGTTCAAGGAGTTTAATGAGCTTGGTAGAGGGAGTTATGGCTTTGTTTACAAGGCTGCTTTGGCAGATGGTAGGGTTGTTGCTGTGAAAAGGGCAAATGCTGCCACGATCATACACACGAATAATCGCGATTTTGAAATGGAGCTGGAAATCTTGTGCAAGATTCGTCATTGTAATATCGTTAACTTGGTTGGTTATTGCGCGGAGATGGGGGAGAGGTTGCTTGTTTATGAGTACATGCCTCATGGGACACTCTTTGATCACCTCCATGGTGGCCTCTCTCCTCTTAATTGGAGCCTTAGGTTGAAGATTGCTATGCAGGCTGCAAAGGGGCTTGAGTACCTTCACAAGGAACTGTCGCCTCCAATTATTCATAGGGATCTCAAGAGCTCAAACATTCTTTTGGATTCAGAGTGGGGGGCGAGGATCGCAGACTTTGGACTACTTGCTTCGAGTGACAAGGATATTAATAGGGACTTGGAGAGTGATGTTTACAACTTTGGGATTGTGTTGCTTGAGATTCTGAGTGGAAGGAAAGCTTATGACAGAGATTTCACTCCTCCTCATGTGGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGGAAGGCAGCTGCTATAATCGATCGGTATGTGGCTCTTCCCAGAAATGTTGAGCCTTTGCTTAAGCTTGCTGATATAGCTGAGCTTGCTGCCAGAGAAAATCCAAGCGAGCGTCCTCCTATGTCAGAAATAGCATCTTGGTTGGAGCAAATTGTGAAGGACGGATTGATCTTATAG 2313 0.4751 MHQVPIFLLVLHFLFHSTSGFGTMGPISASFGKDEFFCAIDAGGNQEVICFGKNTTLQNPSQPTSPSSSPSSLPYFTNVPAMSALSGGAGFLCGILANTSQAFCWGPGKSAGDAVLVPPAYRNIPYSRIAAGKSHVCAIRGSYFSDRASGTVDCWEIAQKRNNTFSAKQSLTFYDPSVSNLELNDVVSGDGFSCGGVRDGGLICWGPNSKDLGVSNVSESFSVLASGKSAFCGVSNSSGDLKCWGDPNSYSDPPPGQVQLVSLSASASHFCGIRKDNHVVECWGSFDPSVVPKGYGFMAIASSDYTTCGIREDDLLLDCWAVNNVSSSKPSFDPPLELSSPGLCRAGPCGPDEFAFNVSVLNEPDLTSLCVRQDLRICSPCGSNCSQGLFLSSPCGLNKDRVCTACSLCQNSSCWGVCGIHPTAGLHLHHLLRWVLIAGSSGLGFLMILACGCVVKRRGNKGAKKQSKSCMGKMEHEDNDMNVVGLNSTPSVASCPGVPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLVGYCAEMGERLLVYEYMPHGTLFDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELSPPIIHRDLKSSNILLDSEWGARIADFGLLASSDKDINRDLESDVYNFGIVLLEILSGRKAYDRDFTPPHVVEWAVPLIKQGKAAAIIDRYVALPRNVEPLLKLADIAELAARENPSERPPMSEIASWLEQIVKDGLIL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0024 770 Gene3D Phosphorylase Kinase; domain 1 481 591 - -
Dod07g0024 770 Gene3D - 18 171 IPR009091 -
Dod07g0024 770 Gene3D - 174 340 IPR009091 -
Dod07g0024 770 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Dod07g0024 770 PANTHER OS01G0750732 PROTEIN 24 768 - -
Dod07g0024 770 SMART serkin_6 514 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0024 770 SUPERFAMILY Protein kinase-like (PK-like) 489 761 IPR011009 -
Dod07g0024 770 Pfam Protein kinase domain 514 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0024 770 Gene3D Transferase(Phosphotransferase) domain 1 671 767 - -
Dod07g0024 770 Gene3D Transferase(Phosphotransferase) domain 1 592 670 - -
Dod07g0024 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Dod07g0024 770 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 24 768 - -
Dod07g0024 770 SUPERFAMILY RCC1/BLIP-II 27 287 IPR009091 -
Dod07g0024 770 ProSiteProfiles Protein kinase domain profile. 514 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0024 Dod-Chr7 242356 245057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0024 7 762 Receptor kinase-like Gene Family AT3G59420 31.030 8.94e-111 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod07g0024 Pkinase 1.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0024 - - aip:107626497 1275