Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0013 ATGGCTTCTGGCAGATCAAGATCTGTAAGGTTTCCTGATGATCTTGAGACAGAGAAGCTAACAGAAAGCAAAGAAAGTAGTCACTTGTCCATGGATGACTATAAAATAATGAGTGGGAAACAGAAGCTTAGGAAGGGTGCAATAGGCAAGTCAGTGGAGGGAAGAGAACTTTCCAGGGTCTTTTCTGAGGATTTTGATGCAGAAGAGATGTTGATATTGGATCCTAGGGGTCCTAGAGTGAATAGATGGAACAAAATCTTCTTGGTAGCATGCTTGATTTCATTGTTTGTGGATCCTCTATTCTTTTACTTACCAGTGGCCAAGAAAGACAAGTGCATTGATATGTCTATTGGTCTTGAAGTGTCCCTTACCATTATTCGGTCAATGGTTGATGCATTTTACATGGTTCAAATTTATGTTCGGTTCCAAACTGCTTATATTGCTCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTGATTATAGACTCATCCAAGATTGCATCAAATTACCTGCATAGGGACTTTTGGCTTGATCTAGTGGCTGCACTGCCACTTCCACAAGTGTTGATTTGGGCAGTAATTCCAAATCTAAAGGGGTCACAAATGTTTGCTTCAAGGCATGTTCTGCGCCTTGTTACCATTTTTCAATACCTCTTGAGGCTGTATCTTATTTATCCCCTATCACATGAAATCATAAAGGCAAAAGGAGTAATGATGGAAAAAGCTTGGGCTGGGGCAGCATATAATCTGATGCTCTATATGCTGGCAAGTCATGTTTTAGGATCCTCTTGGTATCTATTATCAATTGAAAGGCAAGATGAATGTTGGAAGAAAGCTTGTACTCTTCAGTATCCAGATTGCAATTATCATTATCTTGAATGTCAAAGCATAGGTGATCCAGATAGGACTGCTTGGTTCAAATCAAGCAATATCTCAGATCTATGTGATCAGAGCAATGATTTCTTTCAGTATGGCATTTTTGCTGATGCTTTGACTTTGGAGATTACGACCTCAAAATTCTTCAATAAATACTATTACTGCCTTTGGTGGGGACTGAGGAATTTAAGCTCTGTAGGACAGAATCTCTTAACAAGCACACATGTTACAGAGATAAATTTTGCTGTGATTGTTGCAATTCTTGGGTTGGTGCTTTTTGCATTGCTCATAGGCAATATGCAAACCTACCTGCAATCCACCACTATGAGGCTAGAAGAATGGAGAGTAAGACGGATAGATACTGAAAGATGGATGCACCATAGGCAGCTCCCAAGTTACCTTAAGCAAAATGTGAGACGTTATGACCAATTGAGATGGGTTGCTACACGTGGAGTTGATGAGCAAACCATTCTCAGAGACCTTCCTGCTGATCTCAGACGTGACATTAAGCGCCATCTTTGCCTTAATCTAGTTCGACAAGTACCACTATTTGATCAGATGGATGAAAGGATCCTAGATGCAATATGTGAGAGGCTGAAGCCATCTCTATGCACTCCAGGCACGTGCCTAGTCCGTGAAGGTGACCTTGTCAATGAGATGCTCTTCATTGTGAGAGGGCACCTAGACTCTTGCACAACCAATGGTGGCAGAACTGGCTTCTTCAACTCATGCAGAATTGGGCCTGGTGACTTCTGTGGTGAGGAGCTTCTTACATGGGCCTTGGACCCTCGTCCTATTGTGGCCCTTCCATCCTCAACTAGAACAGTTAAGGCCATAACTGAAGTTGAAGCCTTTGCACTCATTGCTGAAGACTTGAAATTTGTTTCAGCCCAATTCAGAAGGCTACATAGCAAGCAACTTAGGCACACTTTCAGGTTCCACTCCCATCAGTGGAGAACATGGGCTGCATGCTTCATACAAGCAGCTTGGTTTAGGTATAAGAGAATGAAGGAAACTAGTGAGCTCAAGAAAAAGGAGAGTACAATGATGATGATGGCCCATGGGCTTGGAAATGGGCCTGAACATTTCTCTGCACCTTTGCAGCCATTTGGTGGGTCAAGTTTTTCAGTGTCTGCAGCAAAGCTGGCAGCAAGCCCAAGGAGAGGTAGGAGCTTGAGGCATGGGCCCGAGCTTAACATTTTCATTGGGTCATTGAGGAAGCCCCTTGAACCAGACTTTGCAAATGATGATATGTGA 2133 0.4285 MASGRSRSVRFPDDLETEKLTESKESSHLSMDDYKIMSGKQKLRKGAIGKSVEGRELSRVFSEDFDAEEMLILDPRGPRVNRWNKIFLVACLISLFVDPLFFYLPVAKKDKCIDMSIGLEVSLTIIRSMVDAFYMVQIYVRFQTAYIAPSSRVSGRGELIIDSSKIASNYLHRDFWLDLVAALPLPQVLIWAVIPNLKGSQMFASRHVLRLVTIFQYLLRLYLIYPLSHEIIKAKGVMMEKAWAGAAYNLMLYMLASHVLGSSWYLLSIERQDECWKKACTLQYPDCNYHYLECQSIGDPDRTAWFKSSNISDLCDQSNDFFQYGIFADALTLEITTSKFFNKYYYCLWWGLRNLSSVGQNLLTSTHVTEINFAVIVAILGLVLFALLIGNMQTYLQSTTMRLEEWRVRRIDTERWMHHRQLPSYLKQNVRRYDQLRWVATRGVDEQTILRDLPADLRRDIKRHLCLNLVRQVPLFDQMDERILDAICERLKPSLCTPGTCLVREGDLVNEMLFIVRGHLDSCTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPIVALPSSTRTVKAITEVEAFALIAEDLKFVSAQFRRLHSKQLRHTFRFHSHQWRTWAACFIQAAWFRYKRMKETSELKKKESTMMMMAHGLGNGPEHFSAPLQPFGGSSFSVSAAKLAASPRRGRSLRHGPELNIFIGSLRKPLEPDFANDDM* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0013 710 Pfam Ion transport protein 83 402 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod07g0013 710 MobiDBLite consensus disorder prediction 9 28 - -
Dod07g0013 710 Gene3D Helix hairpin bin 403 466 - -
Dod07g0013 710 Gene3D Jelly Rolls 473 593 IPR014710 -
Dod07g0013 710 PRINTS EAG/ELK/ERG potassium channel family signature 344 361 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod07g0013 710 PRINTS EAG/ELK/ERG potassium channel family signature 438 445 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod07g0013 710 PRINTS EAG/ELK/ERG potassium channel family signature 138 147 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod07g0013 710 PRINTS EAG/ELK/ERG potassium channel family signature 370 381 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod07g0013 710 PRINTS EAG/ELK/ERG potassium channel family signature 388 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod07g0013 710 PRINTS EAG/ELK/ERG potassium channel family signature 255 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod07g0013 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 707 - -
Dod07g0013 710 SMART cnmp_10 475 606 IPR000595 -
Dod07g0013 710 MobiDBLite consensus disorder prediction 1 28 - -
Dod07g0013 710 CDD CAP_ED 475 606 IPR000595 -
Dod07g0013 710 PANTHER PROTEIN CNGC15A 9 707 - -
Dod07g0013 710 SUPERFAMILY Voltage-gated potassium channels 74 397 - -
Dod07g0013 710 ProSiteProfiles cAMP/cGMP binding motif profile. 475 556 IPR000595 -
Dod07g0013 710 Gene3D - 86 399 - -
Dod07g0013 710 SUPERFAMILY cAMP-binding domain-like 405 596 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0013 Dod-Chr7 122424 127111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0013 49 708 Ion Channels AT2G28260 64.697 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0013 K05391 - gmx:100815543 1170.99