Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0009 ATGGAGACAACAACAATGAACCATGCCAATGGCTCTCATCATCACGACGATGCAACTTTTTGCTTGAGTGCTACTAATGGGGCATCATCACGTGACGCGTCACGTGACCCATTGAACTGGGGTGCTGCGGCTGAGGCTCTGAAGGGGAGCCATGTGGAGGAGGTGAAGAGGATGGTGGAGGAGTACCGGAAGCCGGTGGTGCGGCTCGGCGGCGAGACGCTGACGATAGCGCAGGTGGCGGCGATAGCGACGCAGGACAAGGGCGTGGCGGTGGAGCTGTCGGAGTCTTCAAGGGCTGGCGTTAAGGCGAGCAGTGACTGGGTGATGAACAGCATGGACAATGGCACCGACAGCTATGGTGTTACCACTGGATTCGGAGCTACATCGCACCGGAGAACCAAACAGGGCGGTGCCTTGCAGAAGGAGCTCATTAGGTTCTTGAATGCTGGAATATTTGGCAATGGTACTGAGTCCAATTGTACACTGCCACACACAGCTACCAGAGCAGCCATGCTAGTGAGGATCAACACACTCCTCCAAGGTTACTCAGGCATTAGATTTGAGATCCTAGAAGCCATCACAAAGCTCCTTAACAACAACATCACCCCATGTCTGCCACTTAGGGGAACAATCACAGCTTCTGGTGACCTTGTCCCACTTTCTTACATTGCCGGTTTGCTAACTGGCAGGCCAAATTCCAAGGCTGTGGGGCCCTCTGGGGAGACCCTTAATGCCAAAGAAGCATTCCAAGTGGCAGGAATTGGTTCTGAGTTCTTTGAATTGCAGCCAAAAGAAGGCCTTGCACTTGTGAATGGCACTGCTGTTGGTTCTGGATTAGCCTCAATTGTTCTATTTGAGGCCAATGTTCTAGCTGTTTTGTCTGAGGTTTTGTCAGCAATTTTTGCTGAGGTGATGCAAGGGAAGCCTGAGTTCACTGACCATTTGACACATAAGTTGAAGCACCACCCTGGCCAAATTGAGGCTGCAGCTATTATGGAACACATTTTGGATGGTAGCTCCTATGTGAAGGCCGCTAAGAAGTTGCATGAGATTGACCCTTTGCAAAAGCCTAAACAAGACCGCTATGCACTTAGGACTTCACCACAATGGCTTGGCCCTTTGATTGAAGTGATCAGATTCTCAACCAAGTCAATTGAGAGAGAGATTAACTCTGTGAATGACAACCCCTTGATTGATGTCTCTAGGAACAAGGCCTTGCATGGTGGTAACTTCCAAGGTACACCAATTGGAGTCTCTATGGATAATACACGTTTGGCTATTGCATCAATTGGCAAGCTTATGTTTGCTCAGTTCTCCGAGCTTGTCAATGATTTTTACAACAATGGATTGCCTTCAAATCTTTCTGCTAGTAGGAACCCCAGCTTGGATTATGGATTCAAAGGTGCTGAAATTGCGATGGCAAGTTATTGTTCTGAGCTTCAATATCTCGCAAACCCGGTTACTAGCCATGTTCAAAGTGCTGAGCAGCATAACCAAGATGTGAACTCTTTGGGTTTGATCTCAGCTAGGAAAACAAATGAAGCTGTTGAGATCCTAAAACTCATGTCATCCACTTACTTGGTTGCACTTTGCCAAGCAGTTGATTTGAGGCATTTGGAGGAGAATTTGAAGAACACTGTGAAGAACACTGTGAGCCAAGCTGCAAAGAGGACACTCACCACAGGAGTCAATGGGGAACTCCATCCATCAAGATTCTGTGAGAAGGATCTGCTCAAGATTGTTGATAGGGAGCATGTGTTTGCCTACATTGATGACCCTTGCAGTGCCACATACCCTTTGATGCAAAAGCTAAGGCAAGTGCTGGTGGAACATGCACTGGCTAATGCTGATGATGAGAAGAATGTGAACACATCAATCTTCCAAAAGATCGCTACATTTGAGGAAGAGTTGAAGACCCTTTTGCCTAAAGAGGTTGAGGGCACAAGGCTTGCATATGAGAACAACCAATGTGCTATTCCAAACAAGATCAAGGAATGCAGGTCCTACCCATTGTACAAGTTTGTGAGGGAAGAGTTGGGAACTGAGTTGCTAACTGGGGAGAAGGTGAGGTCACCAGGTGAAGAATGTGAAAAATTGTTCACAGCATTGTGCCAAGGCAAAATCATTGATCCTCTTCTTGAATGCATTGGAGAGTGGAATGGTGCTCCTCTTCCAATATGTTAG 2184 0.4734 METTTMNHANGSHHHDDATFCLSATNGASSRDASRDPLNWGAAAEALKGSHVEEVKRMVEEYRKPVVRLGGETLTIAQVAAIATQDKGVAVELSESSRAGVKASSDWVMNSMDNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGETLNAKEAFQVAGIGSEFFELQPKEGLALVNGTAVGSGLASIVLFEANVLAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISARKTNEAVEILKLMSSTYLVALCQAVDLRHLEENLKNTVKNTVSQAAKRTLTTGVNGELHPSRFCEKDLLKIVDREHVFAYIDDPCSATYPLMQKLRQVLVEHALANADDEKNVNTSIFQKIATFEEELKTLLPKEVEGTRLAYENNQCAIPNKIKECRSYPLYKFVREELGTELLTGEKVRSPGEECEKLFTALCQGKIIDPLLECIGEWNGAPLPIC* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0009 727 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 36 716 IPR005922 GO:0005737|GO:0006559|GO:0016841
Dod07g0009 727 SUPERFAMILY L-aspartase-like 36 727 IPR008948 GO:0003824
Dod07g0009 727 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 209 225 IPR022313 GO:0016841
Dod07g0009 727 CDD PAL-HAL 72 537 IPR001106 -
Dod07g0009 727 Gene3D - 27 273 IPR024083 -
Dod07g0009 727 Pfam Aromatic amino acid lyase 74 546 IPR001106 -
Dod07g0009 727 Gene3D - 540 661 IPR023144 -
Dod07g0009 727 PANTHER HISTIDINE AMMONIA-LYASE 25 727 IPR001106 -
Dod07g0009 727 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 25 727 - -
Dod07g0009 727 Gene3D Fumarase/aspartase (Central domain) 274 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0009 Dod-Chr7 84933 90149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0009 10 727 Monolignol Biosynthesis Gene Families AT2G37040 81.163 0.0 1236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0009 K10775 - gmx:100803857 1285.01