Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0001 TGCCCACTAGGATCTTACTGTCCAATTGCAAAACTGAATAGCCAGACTGGAGTATGTGACCCGTATAGTTACCAGATACCTGCTGGAGAAAAAAATCATACTTGTGGCAGTGCTGATATTTGGTCTGGGGTGGTGAACAACAGTGATATCTTTTGTTCTCCAGGATCATACTGCCCATCTACAACACGCAAAGTTTCTTGTGATAGTGGATATTACTGCAGGATGGGTTCCACTCACCAAAGTTTATGCTCCAGGTTGAGTACTTGTAATCCAAACACAGCATCCCAAAATATGCGTGCATATGGTGTAGCATTGAGTACTCTCCTGATCTTCATTTATAACTGTTCTGATCAAGTTCTAGCTACAAGAGAAAGAAGGAAGGCTAAATCTAGGGAAGCTGCAGCAAAACATGTGAGGGAGATTGCACAAGCCAGAGAAAGGTGGAGAGCAGCAAAAGATATTGCTAAGAAGGGCCTATTGAATGAGAAGCTAAGAACCTTCTCACGCAGAAAATCAGTGAGGCAACAAGAAGAGCAGTTAAAGGTTTTTGGTCAAGCCAATCCTCCTTCAGGTGATAATACCTTGTTGCCACCAGTGGCTCCAAGTTCTTCAAGCACATCCTCTGAGGCTTCAAAAGCCAAGAAAAAAGAGCCTAGCAACCTTACTAAGATGTTGCATTCACTTGAGAATGATCCAAATAGCAGTGAAGGATTCAACATGCAGATTGGAGATAAAAACATTAAGAAACAGATGCCAAAGGGAAAGGATTTGCACACACAAAGCCAAATTTTGAGGTATGCTTATGGTAAGATTGAGAAGGAGAAAGCTCAACAAGAGAAAAACAAGAGCTTGACTTTCTCTGGTGTGATCTCAATGGCTACTGAAGGTGAGGAGATTAGGAGAAGGCCAGTGATTGAGGTGGCTTTCAAGGACTTGACTCTAACTTTGAAAGGGAAAAGAATACACCTGCTGAGGTGTGTGACAGGTAAACTCATGCCTGGTAGAGTCTCAGCTGTGATGGGACCTTCAGGTGCTGGCAAGACCACATTTCTTTCTGCTGTGGCAGGGAAAGCAAGAGGGTGCACCATGACTGGCTCAATTCTAATCAATGGAAGGCCAGAATCCATTCATTGTTATCAAAAAATTATTGGTTTTGTCCCACAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTGTCTGCAGACATGCCAAAACCAGATAAGGTTCTGATTGTTGAGAGAGTAATTGAGTCCTTAGGACTCCAAGGAGTGAGAGATTCACTTGTTGGAACAGTAGAAAAAAGAGGTATATCTGGAGGGCAAAGAAAACGTGTAAATGTAGGGTTGGAGATGGTGATGGAACCTTCACTATTAATCTTAGATGAGCCTACAACTGGTCTTGATAGTGCCTCTTCCACTTTGCTCCTTAAAGCACTTAGACGTGAAGCTCTTGAAGGGGTCAACATATGCATGGTACTTCACCAACCTAGCTATACTTTGTTCAGAATGTTTGATGATATAATATTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGTCCTGTTAAAAAAGTAGAGGAATACTTTGCTGGCATTGGAATCACCGTACCTGATCGGGTGAATCCCCCTGACCACTTCATTGACATTCTAGAAGGCCTAGTGAAACCAAGCAATCCAGGTGTCACTCATCAACAACTTCCTGTGAGATGGATGCTTCACAATGGTTACAGAATACCACCTGATATGCTTCATTTTGCTGATCAAATCTCTGCTTCATCATCATCATCATCATCTTCCTCAAATGTGAATGATGCAACAAAGGGTACTGGTGATGAAGATGGTAATCACCAAACCTTTTCTGGAGAGTTTTGGGATGATAAGAAGAGTAGTGTTGACACACAAAGAGATCATATAGAGGCAAACTCCTTAGTTATCAGGGACTTATCTAACCGAAGAAATCCTGGTGTAGCCCGGCAATATCGATACTACCTTGGCCGGGTTGGTAAGCAGCAGCTGCGAGAAGGAAAATCACAAGCAGTTGACTATCTCCTTTTACTAGTTGCTGGTGCTATCTTAGGAACTCTCACTAAAGTGAATGATGAAACATTTGGTTCCCTTGGATATACATACACAGTTATTGCAGTCTCTCTACTATGCAAGATTGCAGCTCTCAGATCATTTTCTCTGGACAAATTACAATACTGGAGGGAAAGTGCATCTGGGATCAGTAGTCTGGCTCATTTTTTGTCCAAAGACACAGTTGATCTTTTCAACACAATCATCAAGCCAGTGGTTTATCTATCCATGTTCTATTTCTTTAGCAATCCGAGGTCAAGCTTTGGAAGTAATTATGTTATCTTGCTTTGCCTGGTGTACTGTGTAACTGGCATGGCTTATGCATTAGCAATTTACTTTGATCCTGCTCCTGCACAACTGTGGTCAGTGCTTCTACCAGTTGTTATGACACTAATTGCAAACCAAAAAAGAGATACTATACTTATGAAGATCCTAGTAAAATTGTGCTACCCAAATTGGGCTTTGGAGGCCTTTATCATTGCAAATGCTGAAAGGTACACTGGGGTGTGGCTGATAACTCGATGTAGTTCACTGATGAGTAGTGGCTATGATGTGAATGATTGGACCATTTGTCTTGTTGTCCTCATTTTGTATGGTATACTTGCCCGAGCTGTGGCCTTCTATTGTCTTCTGATCACCCAAAAGAAGAGATGA 2763 0.4202 CPLGSYCPIAKLNSQTGVCDPYSYQIPAGEKNHTCGSADIWSGVVNNSDIFCSPGSYCPSTTRKVSCDSGYYCRMGSTHQSLCSRLSTCNPNTASQNMRAYGVALSTLLIFIYNCSDQVLATRERRKAKSREAAAKHVREIAQARERWRAAKDIAKKGLLNEKLRTFSRRKSVRQQEEQLKVFGQANPPSGDNTLLPPVAPSSSSTSSEASKAKKKEPSNLTKMLHSLENDPNSSEGFNMQIGDKNIKKQMPKGKDLHTQSQILRYAYGKIEKEKAQQEKNKSLTFSGVISMATEGEEIRRRPVIEVAFKDLTLTLKGKRIHLLRCVTGKLMPGRVSAVMGPSGAGKTTFLSAVAGKARGCTMTGSILINGRPESIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQGVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGITVPDRVNPPDHFIDILEGLVKPSNPGVTHQQLPVRWMLHNGYRIPPDMLHFADQISASSSSSSSSSNVNDATKGTGDEDGNHQTFSGEFWDDKKSSVDTQRDHIEANSLVIRDLSNRRNPGVARQYRYYLGRVGKQQLREGKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSLDKLQYWRESASGISSLAHFLSKDTVDLFNTIIKPVVYLSMFYFFSNPRSSFGSNYVILLCLVYCVTGMAYALAIYFDPAPAQLWSVLLPVVMTLIANQKRDTILMKILVKLCYPNWALEAFIIANAERYTGVWLITRCSSLMSSGYDVNDWTICLVVLILYGILARAVAFYCLLITQKKR* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0001 920 Pfam ABC-2 type transporter 505 919 IPR043926 GO:0140359
Dod07g0001 920 ProSitePatterns ABC transporters family signature. 448 462 IPR017871 GO:0005524
Dod07g0001 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 307 530 IPR027417 -
Dod07g0001 920 MobiDBLite consensus disorder prediction 182 220 - -
Dod07g0001 920 Coils Coil 127 147 - -
Dod07g0001 920 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 915 - -
Dod07g0001 920 CDD ABCG_EPDR 305 531 - -
Dod07g0001 920 Pfam ABC transporter 327 475 IPR003439 GO:0005524
Dod07g0001 920 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 307 548 IPR003439 GO:0005524
Dod07g0001 920 SMART AAA_5 333 525 IPR003593 -
Dod07g0001 920 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 1 915 - -
Dod07g0001 920 MobiDBLite consensus disorder prediction 600 642 - -
Dod07g0001 920 MobiDBLite consensus disorder prediction 182 209 - -
Dod07g0001 920 MobiDBLite consensus disorder prediction 600 627 - -
Dod07g0001 920 Gene3D - 296 543 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0001 Dod-Chr7 6703 12699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0001 334 527 Calmodulin-binding Proteins AT2G36910 27.723 3.78e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0001 - - gmx:100812387 1526.92