Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2836 ATGCCTGCCGTTTACGGAGCGCGCCTCACCACCTTCGAGGACTCCGAGAAGGAGAGCGAATACGGTTACGTTCGCAAGGTATCTGGACCGGTCGTGGTTGCTGATGGAATGGCTGGGGCTGCTATGTATGAACTGGTGCGTGTTGGTCGTGACAATCTGATTGGTGAAATCATTCGTCTGGAAGGGGATTCTGCTACTATCCAAGTTTACGAGGAGACTGCTGGTTTGATGGTTAACGATCCAGTGTTGCGGACACACAAGCCTTTGTCTGTGGAGTTGGGGCCTGGAATACTGGGAAATATTTTTGATGGAATTCAGAGGCCCTTGAAAACTATTGCTAAAAGATCTGGTGATGTCTATATTCCTCGTGGTGTCTCTGTTCCTGCCCTTGACAAAGATACACTATGGGAATTTCAGCCTAAGAAAATTGGTGAAGGAGACCTATTAACTGGTGGAAGTCTATATGCGACTGTTTTCGAGAACAGTCTAATGCAACACCATGTTGCACTTCCTCCTGATGCTATGGGAAAGATAACCTACATTGCACCTCCTGGCCAATATTCCTTGAAGGATACTGTGTTGGAGCTTGAGTTTCAAGGTGTCAAAAAGAACTTCACCATGCTTCAGAGTTGGCCTGTACGTACACCAAGGCCTGTTGCATCAAAACTTGCAGCTGATACTCCTCTTCTTACTGGTCAGCGTGTTCTTGATGCCCTCTTCCCCTCTGTTCTCGGTGGGACTTGTGCCATACCTGGAGCTTTTGGTTGTGGTAAAACAGTCATTAGTCAGGCTCTTTCTAAGTATTCCAATTCTGATTCTGTTGTTTATGTTGGTTGCGGGGAACGTGGAAATGAAATGGCAGAAGTTCTGATGGACTTCCCACAACTTACAATGACATTGCCTGATGGCCGTGAAGAATCTGTCATGAAGCGTACAACACTGGTGGCTAACACTTCAAACATGCCAGTCGCCTGCTCGTGA 981 0.4699 MPAVYGARLTTFEDSEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGRDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGSLYATVFENSLMQHHVALPPDAMGKITYIAPPGQYSLKDTVLELEFQGVKKNFTMLQSWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDSVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVACS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2836 326 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 232 324 IPR000194 GO:0005524
Dod06g2836 326 CDD V_A-ATPase_A 88 324 - -
Dod06g2836 326 Gene3D - 134 204 - -
Dod06g2836 326 Gene3D - 20 88 IPR023366 -
Dod06g2836 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 324 IPR027417 -
Dod06g2836 326 Pfam ATP synthase alpha/beta family, beta-barrel domain 25 85 IPR004100 GO:0046034|GO:1902600
Dod06g2836 326 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 3 325 - -
Dod06g2836 326 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 17 89 IPR036121 GO:0046034|GO:1902600
Dod06g2836 326 CDD ATP-synt_V_A-type_alpha_N 21 87 - -
Dod06g2836 326 Gene3D - 89 326 IPR027417 -
Dod06g2836 326 Pfam ATPsynthase alpha/beta subunit N-term extension 102 223 IPR031686 -
Dod06g2836 326 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 3 325 IPR022878 GO:0046034|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2836 Dod-Chr6 59694984 59697716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2836 1 325 Primary Pumps ATPases(2) AT1G78900 92.308 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2836 K02145 - gmx:100775727 630.557