Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2827 ATGGAAAAAAAAATGAAGGAGAAGGAGAAGGAGGCCGAGAAGAAGAAGTACCCTATCGGTGCAGAGCATTACGATCTCTACGAGGAGATTGGGCACGGCGTCAGCGCCTCCGTCCACCGCGCTCTCTGCTTCCCATTCAACGAGATCGTCGCCATCAAGATCCTCGACTTCGAGCGCGACAACTGCGATCTGAACAATGTTTCTCGTGAAGCGCAGACGATGGTGCTGGTGGACCACCCTAACGTGCTGAAATCGCACTGCTCCTTCGTGAACGAACACAGCCTGTGGGTGGTGATGCCGTTCATGGCGGGAGGATCCTGCCTTCACATTCTGAAGGCCGCTCACCCCGACGGCTTTGAGGAGGTTGTCATCGCCACCATCCTGCGGGAAGTCCTGAAGGGTTTGGAGTACCTTCATCACCATGGACACATCCACAGAGACGTCAAGTCCGGCAACATTCTTATCGATTCCCGCGGCGCCATCAAGCTCGGCGACTTCGGTGTATCTGCTTGCCTATTTGATTCCGGTGACAGGCAGCGCACCAGGAATACATTTGTTGGAACTCCTTGTTGGATGGCACCTGAAGTCATGGAGCAACTTCACGGTTATAACTTCAAAGCTGACATCTGGTCATTTGGCATAACCGCTTTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTTATGACTTTGCAAAATGCACCCCCTGGCCTTGACTATGAAAGGGATAGGAAGTTCTCTAAGTCGTTTAAGCAGATGATTGCTAGTTGCTTAGTGAAAGATCCTACGAAACGACCCTCTGCAAGCAAGTTGTTGAAGCATTCCTTCTTCAAGCAAGCTCGCTCCAACGATTACATTGCACGAACACTTTTGGAGGGGCTGCCAGCTTTAGGTGATCGCATGCAGGCCCTAAAGAGAAAAGATGAAGATATGCTTGCACAAAAGAAGATGCCTGATGGCGAGATGGAGGAATTATCACAGAATGAATACAAACGAGGGATTAGTGGCTGGAACTTCAATCTTGAAGATATGAAGGCTCAGGCTTCCTTGATCCATGATTTTGATGATGCTATATCAGATATCAATCAAGTAGCAAGTTCATGTTCTTTATCTTCTCTTGATGCACAAGATAAACCAAGTGCAAGTCATAATCCTTCTCAAACTGCTGATCCGGAAGATAATGATGAGATACAAAATCAATCAGCTTCTGTTCCAGTAGTTGAATCCACAGTGAATGATGCCACAGTGAATGATGCCAAGAACAAGCTTGAAAAATCTGGTGATGACTCTAGCATCACCAGTTCAAGCCATGAACGGAACTTTTCACAAGCTTCTCCATCCTGTCGTGATGATCGTGTGGACCATAGTGTGGGAGAAAAATCTGATGTGATAAATGGTGGCAGATCTGTAGAGGGCATGACTATTCATTCTTCTCATAAAAGAGGATCCTCATCAAGCATTTTACCTGAAGTAACTCTTCCACCTGTTCGAGCAGAAAGTGAGAAGCCACACAATCTGCCCCAGAACATTCCAAGTGGCAATTCAACTTCAGTTCCACACGCAGGAGAGGATGTACTTACTGAACTTCCTTCTAAAGTCTCAAAATCATCAGCTACTTCTGATGATACTGATGAGAAAGCAAAAGTGCCAGTTGTTCAACAGAGAGGACGTTTTAAGGTTACATCAGAGAATGTTGACCCGGAAAAGGTGGGCCCTTCTCCTGTACTGCAAAAGAGTCACAGCATGCAGGTTATTAGCCAGCATAATGTTCCCCCTCCTCTGCCTTCGACTTTACCATTATTATCAGCACCTGATGCGGCAACATCAAATCCTTCTGGTGGTTCTCTTTTCCCAGTGTTGCACTCTGTGTTGCAGACAAATATTCTTCAAAGGGAGACCATTTTAAGTTTAATGAAGCAAATCACTGCTGGTGACACTACAGCTGATGGAACAAGTACCCCGGCACATATAGCAGCAATTGAGAAATCTTTGCTTGAAGCAGCTCACGATCGGGAGAAGGAGCTACTTCATGAGATAACTGACTTGCAGTGGAGGCTGATATGTACCCAGGAAGAGCTTCAAAAATTGAGAACAGAAAACGCGCAGGTATGA 2136 0.4649 MEKKMKEKEKEAEKKKYPIGAEHYDLYEEIGHGVSASVHRALCFPFNEIVAIKILDFERDNCDLNNVSREAQTMVLVDHPNVLKSHCSFVNEHSLWVVMPFMAGGSCLHILKAAHPDGFEEVVIATILREVLKGLEYLHHHGHIHRDVKSGNILIDSRGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPTKRPSASKLLKHSFFKQARSNDYIARTLLEGLPALGDRMQALKRKDEDMLAQKKMPDGEMEELSQNEYKRGISGWNFNLEDMKAQASLIHDFDDAISDINQVASSCSLSSLDAQDKPSASHNPSQTADPEDNDEIQNQSASVPVVESTVNDATVNDAKNKLEKSGDDSSITSSSHERNFSQASPSCRDDRVDHSVGEKSDVINGGRSVEGMTIHSSHKRGSSSSILPEVTLPPVRAESEKPHNLPQNIPSGNSTSVPHAGEDVLTELPSKVSKSSATSDDTDEKAKVPVVQQRGRFKVTSENVDPEKVGPSPVLQKSHSMQVISQHNVPPPLPSTLPLLSAPDAATSNPSGGSLFPVLHSVLQTNILQRETILSLMKQITAGDTTADGTSTPAHIAAIEKSLLEAAHDREKELLHEITDLQWRLICTQEELQKLRTENAQV* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2827 711 MobiDBLite consensus disorder prediction 380 425 - -
Dod06g2827 711 MobiDBLite consensus disorder prediction 513 529 - -
Dod06g2827 711 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 710 - -
Dod06g2827 711 Gene3D Transferase(Phosphotransferase) domain 1 105 338 - -
Dod06g2827 711 MobiDBLite consensus disorder prediction 380 583 - -
Dod06g2827 711 Coils Coil 687 707 - -
Dod06g2827 711 CDD STKc_OSR1_SPAK 22 285 - -
Dod06g2827 711 ProSiteProfiles Protein kinase domain profile. 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2827 711 MobiDBLite consensus disorder prediction 452 469 - -
Dod06g2827 711 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Dod06g2827 711 MobiDBLite consensus disorder prediction 484 498 - -
Dod06g2827 711 MobiDBLite consensus disorder prediction 436 451 - -
Dod06g2827 711 MobiDBLite consensus disorder prediction 546 560 - -
Dod06g2827 711 Gene3D Phosphorylase Kinase; domain 1 12 101 - -
Dod06g2827 711 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 710 - -
Dod06g2827 711 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Dod06g2827 711 SMART serkin_6 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2827 711 Pfam Protein kinase domain 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2827 Dod-Chr6 59631167 59639090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2827 13 693 MAP Kinase Kinase Kinase Kinase AT1G79640 62.609 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Dod06g2827 Pkinase 1.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2827 K08835 - gmx:100780339 1134.01