Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2824 ATGGACAAAGAAAGAAAGCAGCAAAATCAAGACATCATATTCAGGTCCAAGCTTCCGGATATCTACATCCCCAAACACCTCCCCTTACATTCCTATTGCTTCGAGAACCTCTCACAGTTTGGATCACGCCCATGCTTGATCGATGCCCCCACGGGTGAAACCTACACCTACTTTGACGTTGAGCTCACAGCACGAAGAGTAGCCTCGGGACTCAACAAGCTTGGCATCCAACAAGGCGAGAAATTACAAATCTTAATTTGTGACAAAGGTGATCATGATCCTATTGCCGAATTCACCACAGTTTGTGTTCGCATTTCTCGGCGCCTCCTTTCATGGGGCCATTGCCACTGGCGCCAACCCCCTTTTACCCCTGTCGAGATCGCCAAACAAGCCAAAGCTTCAAATGCAAAGTTGCGCATAACACAATCTTGTTCCTGTGATAAAGTGAAGGAGTTAGAGCATCATTTGAAGCTCATGTTCGCGGACACTCCCCCAGAGGGGCACCTTCATTTCTCAGAGCTAGACCAAGCAAACGAGAGCGAAATCCCGAATGTGAAGATCAACCTTGAAGATGTCGTTGCACTCCTTTATTCGTCGGGAACAACAGGGTTGCCAAAGGGTGTTATGTTGACACACAAAGGTTTGGTGACTAGTGTTGCACAACAAGTTGATGGGGAGAACCCAAACCTTTATTTCCATAGTGAGGATGTTCTTATTTGTGTGCCTCCCTTGTTTCATATTTATTCACTCAATTCTGTGGTATTGTGCGGGTTGAGGGCCAAGGCTACGATCTTGTTGATGCCCAAGTTCGATATTAATGCATTCTTGGGGCTAATTCAGAAACACAAGGTCACCATTTGCCTTGTTGGGCCGCCCGTTGTGCTGGCCATTGCGAAGTCACCGAATCTTAATGGTTATGACTTGTCTTCTATTAGGGTGTTGAAATCTGGTAGGGCTTCCCTTGGGAAAGAACTTGAAGACGCTATCAGGGCCAAATTCCCCAAAGCTAAATTTGGACAGGGATATGGGATGACAGAGGCAGGTCCAGTATTAACAATGTGCTTAACATTTGCTAAAGAACCGATAGATGAAAAACTATGCTCATGTGGAACTGTTGTCAGAAATGCAGAGATGAAGATTGTGGATCCTGAAGCTAATCAATCTCTACCACAGAATCAACCTGGTGAAATTTGTATCCGAGGGGACCAGATCATGAAAGGTTACCTAAATGATTCTGAGGGTACAAAGAGAACCATAGACAAAGAAGGTTCGGTTGCATACGGGTGA 1287 0.4553 MDKERKQQNQDIIFRSKLPDIYIPKHLPLHSYCFENLSQFGSRPCLIDAPTGETYTYFDVELTARRVASGLNKLGIQQGEKLQILICDKGDHDPIAEFTTVCVRISRRLLSWGHCHWRQPPFTPVEIAKQAKASNAKLRITQSCSCDKVKELEHHLKLMFADTPPEGHLHFSELDQANESEIPNVKINLEDVVALLYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSEDVLICVPPLFHIYSLNSVVLCGLRAKATILLMPKFDINAFLGLIQKHKVTICLVGPPVVLAIAKSPNLNGYDLSSIRVLKSGRASLGKELEDAIRAKFPKAKFGQGYGMTEAGPVLTMCLTFAKEPIDEKLCSCGTVVRNAEMKIVDPEANQSLPQNQPGEICIRGDQIMKGYLNDSEGTKRTIDKEGSVAYG* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2824 428 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Dod06g2824 428 Gene3D - 3 428 IPR042099 -
Dod06g2824 428 Pfam AMP-binding enzyme 35 422 IPR000873 -
Dod06g2824 428 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 8 425 - -
Dod06g2824 428 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 425 - -
Dod06g2824 428 SUPERFAMILY Acetyl-CoA synthetase-like 14 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2824 Dod-Chr6 59593557 59605729 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2824 4 428 Monolignol Biosynthesis Gene Families AT3G21240 59.535 6.22e-178 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2824 K01904 - qsu:112001847 560.451