Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2821 ATGAGGCCGAACCAATCTCCACCGCCGAACTCCTCCGCCGCCGTCAACATCAACAACCACAGCAACAGCAACAGCAACAGCAACAGCAGGGTAAGTCGCCGGCGCCGGGACCTGACCCTGCCGCTGCCGCAGCGCGACACCAACCTCGCGGTGCCGCTCCCGCTGCCTCCGTCCTCGGCGTCCAGCTCCGGCCCCAGCGGCCACCAGTTCATCCCTTTCTCGGAGCTTGAGCGCCTCAACCGCATCGGGAGCGGCAGCGGCGGCACCGTCTACAAGGTCGTGCACCGACCTACCTCGCGCGTGTTCGCGCTCAAGGTGATCTACGGCCACCACGAGGAGTCCGTGCGTCGCCAGATCCACCGCGAGATCCAGATCCTCCGCGACGTGGACGATCCGAACGTGGTGAAGTGCCACGACATGTACGACCACAACGGCGAGATCCAGGTCCTTCTCGAGTTCATGGACGAAGGCTCGCTCGAAGGGAAGCACATCCCGCAGGAGAGCCAGCTGGCGGATCTGGCTCGCCAGATCCTGCGAGGCCTGGCTTACCTGCACCGCAGGCACATCGTGCACCGCGACATCAAGCCGTCGAACCTGCTCGTGAACTCGCGGAAGCAGGTCAAGATCGCGGACTTCGGCGTAGGGAGGATCCTCAACCAGACGATGGATCCGTGCAACTCGTCCGTGGGGACGATCGCGTACATGAGCCCCGAGAGGATCAACACCGACATCAATGACGGACAGTACGACGCTTACGCCGGTGACATATGGAGCCTCGGGGTTAGCATCTTGGAGTTCTACATGGGGAGGTTTCCGTTCGCGGTTGGGAGGCAAGGGGACTGGGCGAGCCTGATGTGCGCGATTTGTATGTCGCAGCCGCCGGAGGCGCCGCACACTGCGTCGCCGGATTTTAGGGATTTTGTGTCGCGGTGCTTGCAGAGGGATCCGTCTAGAAGGTGGCCCGCGTTGAAGTTGCTTGGCCATCCTTTTATTGCTCAACAGAGTCAGGTTCACAACAACCTCCACCAGCTCCGGCCTCCTCCACCGAGGCCACTGTCTTCCTAG 1065 0.6244 MRPNQSPPPNSSAAVNINNHSNSNSNSNSRVSRRRRDLTLPLPQRDTNLAVPLPLPPSSASSSGPSGHQFIPFSELERLNRIGSGSGGTVYKVVHRPTSRVFALKVIYGHHEESVRRQIHREIQILRDVDDPNVVKCHDMYDHNGEIQVLLEFMDEGSLEGKHIPQESQLADLARQILRGLAYLHRRHIVHRDIKPSNLLVNSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPHTASPDFRDFVSRCLQRDPSRRWPALKLLGHPFIAQQSQVHNNLHQLRPPPPRPLSS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2821 354 CDD PKc_MAPKK_plant_like 74 331 - -
Dod06g2821 354 SUPERFAMILY Protein kinase-like (PK-like) 73 352 IPR011009 -
Dod06g2821 354 Pfam Protein kinase domain 77 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2821 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Dod06g2821 354 ProSiteProfiles Protein kinase domain profile. 76 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2821 354 MobiDBLite consensus disorder prediction 1 68 - -
Dod06g2821 354 Gene3D Phosphorylase Kinase; domain 1 61 155 - -
Dod06g2821 354 MobiDBLite consensus disorder prediction 7 29 - -
Dod06g2821 354 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 30 349 - -
Dod06g2821 354 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Dod06g2821 354 SMART serkin_6 76 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2821 354 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 30 349 - -
Dod06g2821 354 Gene3D Transferase(Phosphotransferase) domain 1 157 345 - -
Dod06g2821 354 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2821 Dod-Chr6 59575646 59578304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2821 1 343 MAP Kinase Kinase Gene Family AT1G51660 68.132 8.55e-169 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Dod06g2821 Pkinase 7.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2821 K13413 - gmx:100786390 535.028