Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2773 ATGGAAGGAGAGAGAGGTGATCCCAGTTATGAGCTCCAGGTTTCATTCACAAACACCCCTCAAGCCATCCACGAAATAGGTTTTGTTCAATTTGAAGATAACCAGGTCCTTAGCTTCTTGGCACCTTCTGCACAGTCCCAATCTTCTCAGCTCTCTCAATCTCTTAACGACGGCCGTGGTGGTGGCAGCAACAACACTACTACTGCCTCTGCCACTGCCGCGTCCAACGCCGCTGCCACCGCAATTGGGTTCAGCCATAACGACCTTGTTGCCAGAACATCTTGGAATAATGAACAGGTTCGAACTCTAGATCCCAAGGCTGTTAATGATGAAAACTGCTGCACTGGAAATACTAGTGATGGCAGCAACACATGGTGGAGGAGTGCAGCCTCAGAGAAGGGGAAGGTGAAAGTGAGGAGGAAGCTGAGAGAGCCAAGGTTTTGTTTCCAAACGAGAAGTGATGTGGATGTGCTTGATGATGGTTATAAATGGAGGAAGTACGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTACTACCGCTGCACCCATAGCAACTGTAGGGTGAAGAAAAGAGTTGAAAGACTCTCAGAAGATTGTCGTATGGTGATTACCACTTATGAAGGCAGACACAATCACTCTCCTTGTGACGACTCAAATTCATCTGAACAAGAATGTTTTACCTCCTTTTGA 699 0.4678 MEGERGDPSYELQVSFTNTPQAIHEIGFVQFEDNQVLSFLAPSAQSQSSQLSQSLNDGRGGGSNNTTTASATAASNAAATAIGFSHNDLVARTSWNNEQVRTLDPKAVNDENCCTGNTSDGSNTWWRSAASEKGKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEQECFTSF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2773 232 SUPERFAMILY WRKY DNA-binding domain 150 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod06g2773 232 Gene3D WRKY domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod06g2773 232 Pfam WRKY DNA -binding domain 159 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod06g2773 232 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod06g2773 232 ProSiteProfiles WRKY domain profile. 153 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod06g2773 232 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 12 230 - -
Dod06g2773 232 MobiDBLite consensus disorder prediction 48 71 - -
Dod06g2773 232 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 230 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2773 Dod-Chr6 58993427 59001970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2773 3 232 WRKY Transcription Factor Family AT2G44745 53.586 1.08e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod06g2773 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2773 - - var:108347245 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2773 06 58993427 59001970 Dod06g2773 06 58993427 59001970 ECH