Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2749 ATGGAACCTCGAGTTGGGAACAAGTTCCGTATCGGTCGGAAAATTGGTAGCGGATCCTTTGGGGAGATCTATCTTGGTACTAATATTCAGACAAATGAAGAGGTTGCGATTAAGCTTGAAAATGTCAAAACCAAGCACCCTCAGTTGCTGTATGAATCAAAGCTGTATAAAATACTTCAAGGAGGAACTGGGATCCCGAATGTGAAATGGTTTGGCGTAGAAGGAGAATACAACATCCTTGTCATGGATTTACTGGGCCCTAGTCTTGAGGATTTATTCAATTTCTGTAGTCGGAAATTGTCGCTAAAAACTGTTCTCATGCTTGCTGATCAGATGATAAATCGAGTGGAATTTGTTCATTCCAAATCTTTTTTACATCGGGACATCAAGCCAGACAACTTCCTCATGGGTTTAGGGAGGCGTGCGAATCAAGTGTATATCATTGACTTTGGTCTTGCTAAGAAATACAGAGACACTACTACACATCAGCATATTCCTTACAGAGAGAATAAGAATTTGACAGGAACTGCTAGGTATGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGATGATTTAGAGTCACTTGGATATGTTCTTATGTATTTTTTAAGAGGAAGCCTGCCTTGGCAGGGATTGAAAGCAGGTAACAAGAAGCAGAAATATGAGAAAATCAGTGAGAAGAAAGTTTCTACTTCAATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTCGCATCATACTTCCATTACTGTCGGTCGCTTAGGTTTGATGATAAACCAGATTATGCTTATTTGAAAAGACTTTTCCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATCCTGAAATATCAGCAATCTCAAATTGTCACTCCTCCTGCACGTGCTGTTGCTCCTGCTGCTGGACCAAGTTCTGGCCTGCCACCAGCTGTTGTGAATGCTGATGTACAGTCAGGTGGGGAAGATGGTAGGCAAACTGGTTGGTCTTCATCAGATCCTACTCGTAGAAGAAACTCTGGGCCTATTGCTAATGATGGAATCTTATCTAGACAAAAGGCCCCACTTACAAATGACTCATCTGGATCTAAAGATGCTATGTTGTCAAGTGCTAATTTCTTCCGGTCAAGTGGATCTGCTAGGCGAGGTGCTGTCTCCAGCAGCCGTGATGCAGTCATCAGTGGTGAGACTGAGCCCTCTCGTCCTCCCACCATGGATCCAAGTCAGGGAGCACTTCGCAAAATATCTGGTGCTCAAAGAAGTTCACCTATCATGTCATCTGAGCACAACCGAGCATCCTCCGGCAGAAACCTGGCAAACGGAAAGAACTTGGAATCAACTCTTAGAGGTATAGAGAGCCTGCATTTCAATGACGAGAGGGTACAGTATTAG 1422 0.4318 MEPRVGNKFRIGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNVKWFGVEGEYNILVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIVTPPARAVAPAAGPSSGLPPAVVNADVQSGGEDGRQTGWSSSDPTRRRNSGPIANDGILSRQKAPLTNDSSGSKDAMLSSANFFRSSGSARRGAVSSSRDAVISGETEPSRPPTMDPSQGALRKISGAQRSSPIMSSEHNRASSGRNLANGKNLESTLRGIESLHFNDERVQY* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2749 473 MobiDBLite consensus disorder prediction 330 349 - -
Dod06g2749 473 PANTHER CASEIN KINASE-RELATED 1 458 - -
Dod06g2749 473 MobiDBLite consensus disorder prediction 387 404 - -
Dod06g2749 473 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Dod06g2749 473 MobiDBLite consensus disorder prediction 307 374 - -
Dod06g2749 473 SMART serkin_6 9 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2749 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dod06g2749 473 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Dod06g2749 473 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2749 473 MobiDBLite consensus disorder prediction 424 451 - -
Dod06g2749 473 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Dod06g2749 473 Pfam Protein kinase domain 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2749 473 MobiDBLite consensus disorder prediction 387 451 - -
Dod06g2749 473 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 458 IPR030509 GO:0004672|GO:0005524
Dod06g2749 473 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2749 Dod-Chr6 58634658 58639840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2749 7 228 CBL-interacting serine-threonine protein kinases AT5G58380 28.112 1.71e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Dod06g2749 Pkinase 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2749 K02218 - gmx:100778165 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1872 10 40190158 40194645 Dod06g2749 06 58634658 58639840 PCT