Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2747 ATGACGCGGGGGAGGATAAGGGCAAGGATCCGGAGGAGCCATCTCTACACATTCTGCGTCCGGCCTAGCACCACCGATGAGGGGCCTCACTCACTTGGCGGCCCTGGATACACGCGAACCGTGCATTGCAACCAGCCTCTTGAACATGACAAGAGGCCTTACTTCTACCGCAAGAATGGCATATCCACAACAAAATACAATATCATAACATTTTTGCCTAAGGCACTCTTCGAACAGTTTCGAAGGGTTGCTAACATGTACTTCCTTCTGGCTGCGTGCCTGTCGCTGTCTCCTATGTCACCTTTCAGCCCTCTAAGCATGATTGCACCATTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCGTTGGAGGATTCGCGAAGGTTTGTTCAGGATGTGAACATTAATCGCCGGAAGGTTAGTCGCCATCAGGGCAATGGTGCTTTTGGTCCAGGGATGTGGAAGAATATTATGGTTGGTGATGTGGTTAGAGTAGAGAAGGATCAGTTTTTCCCAGCTGATATGCTTTTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTTGAAACAATGAATCTAGATGGGGAGACAAACTTGAAGGTGAAGCGATCTTTGGAAACTACATTGCCTCTTGATAGTGATGAGGCATTTAAGGATTTCTCAGGGACAATACATTGTGAAGACCCGAACCCGAGTCTCTACACTTTTGTTGGAAACTTGGAGTATGAACGCCAGGTTTACCCTCTTGATCCTAGTCAAATTCTGCTCCGAGATTCTAAGCTCAGAAACACTGAACACATATATGGGGTTGTCATTTTCACTGGTCACGACAGCAAAGTCATGCAGAATTCCACACAATCCCCTTCGAAACGGAGCACAATAGAGAAAAAGATGGATCGGATCATATACGCTCTCTTCAGTGTCCTTCTTTTCATATCTTTGTTAAGTTCCTTGGGATTTATCCTGAGGACTAAGTACCAAGTTCCGAAGTGGTGGTACTTCCGGCCTGACAACATTGAATCCCAGTATGATCCCAATAAAATTGGATTGGCTGGGATGAGTCATTTGATCACTGCACTCATTCTTTATGGATATTTGATTCCCATCTCGCTTTATGTCTCGATTGAGGTTGTGAAGGTTTTACAGGCAACCTTCATTAACCAAGACATTCAAATGTATGATGATGAATCTGGAGTCCCGGCTAACGCGAGGACATCGAATTTGAATGAAGAGTTGGGTCAGGTTGACACCATCCTTTCTGATAAAACTGGCACTTTGACTTGCAACCAGATGGACTTTTTGAAGTGTTCCATTGCTGGTGTTGCATATGGTGTGCGATCCAGCGAAGTCGAAATTGCTGCAGCAAACAAGATGGCCTCTGATTTTGAGATTGGGGATTCAGATCTCTCCAATTTCCCCACGCCTAGCAGTAAAGAAATTGAATTGGAGACTGTTGTTACTTCCAAAGGTGATGAGGCTCAAAGGCATGCCATAAAGGGGTTTAGTTTCGAGGACAAGCGGCTGATGAATGGCAACTGGTGGAAAGAGTCCAACACTGATGACCTTCTGTTATTTTTCCGTATATTATCGGTCTGCCATACCGCCATTCCTGATCTGCATGAGGAGACGGGCACTTATACATATGAAGCAGAGTCACCTGATGAAGGGGCTTTTCTTGTAGCAGCAAGAGAATTTGGTTTTGAGTTTTGCAGGAGGACTCAGTCAAGTGTTTTCGTGCGTGAAAAATTTTCTGCCTCAGGACAAATGGTTGAAAGAGAGTACAAACTCTTGAATCTGTTAGATTTCACTAGCAAAAGAAAGCGTATGTCAGTGATTGTGCGCGATGAGGAGGGAAACATTTTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGTTTGTCAAAGAAAGGAAAGGCATATTTGCAGGCTACTACTAGACATTTAAATGAATATGGAGAAGCTGGGTTGCGAACACTAGCCCTGGCTTATAGAAGGCTTGATGAGGAAGAGTACTCTGCTTGGAACAATGAGTTTCAGAAAGCCAAAGCAGCTGTTGGGGCTGACAGAGAGGCAACACTTGAGCGGATTTCAGAGATTATGGAAAAAGAGTTGATTCTTGTTGGGGCGACAGCTGTGGAAGACAAACTGCAGAAAGGGGTGCCCCAATGCATTGATAAGCTTGCCCAAGCTGGTCTCAAGATCTGGGTGTTGACTGGGGATAAGATGGAAACTGCAATCAACATTGGATTTTCTTGTAGTTTGCTTCGACAGGGCATGAAGCAAATCTGTATAACTGTGCCGAATTCAGATGCAGTGACCAATGATAGCAAAGAGGTCTTTTGTGCACCGCAGGTAATCAAGGAAAACATCCAGAATCAAATCACCAATGCCTCACAGATGATAAAGCTAGAGAAGGATCCTCATGCTGCATTCGCATTAATTATTGATGGAAAAACGTTGACATATGCTTTAGAAGATGATATGAAGCATGAATTTCTGGCATTGGCTGTTGATTGTGCATCAGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTAGTAAAAGAAGGAACCCGGGAAGACCACTCTAGCTATAGGTGA 2628 0.4437 MTRGRIRARIRRSHLYTFCVRPSTTDEGPHSLGGPGYTRTVHCNQPLEHDKRPYFYRKNGISTTKYNIITFLPKALFEQFRRVANMYFLLAACLSLSPMSPFSPLSMIAPLAFVVGLSMAKEALEDSRRFVQDVNINRRKVSRHQGNGAFGPGMWKNIMVGDVVRVEKDQFFPADMLFLSSSYEDGICYVETMNLDGETNLKVKRSLETTLPLDSDEAFKDFSGTIHCEDPNPSLYTFVGNLEYERQVYPLDPSQILLRDSKLRNTEHIYGVVIFTGHDSKVMQNSTQSPSKRSTIEKKMDRIIYALFSVLLFISLLSSLGFILRTKYQVPKWWYFRPDNIESQYDPNKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDESGVPANARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGVAYGVRSSEVEIAAANKMASDFEIGDSDLSNFPTPSSKEIELETVVTSKGDEAQRHAIKGFSFEDKRLMNGNWWKESNTDDLLLFFRILSVCHTAIPDLHEETGTYTYEAESPDEGAFLVAAREFGFEFCRRTQSSVFVREKFSASGQMVEREYKLLNLLDFTSKRKRMSVIVRDEEGNIFLMCKGADSIIFDRLSKKGKAYLQATTRHLNEYGEAGLRTLALAYRRLDEEEYSAWNNEFQKAKAAVGADREATLERISEIMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITVPNSDAVTNDSKEVFCAPQVIKENIQNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDMKHEFLALAVDCASVICCRVSPKQKALVTRLVKEGTREDHSSYR* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2747 875 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 428 673 IPR023299 GO:0000166
Dod06g2747 875 CDD P-type_ATPase_APLT_Dnf-like 59 867 - -
Dod06g2747 875 Pfam Cation transport ATPase (P-type) 549 638 - -
Dod06g2747 875 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 867 - -
Dod06g2747 875 Gene3D - 418 430 IPR023214 -
Dod06g2747 875 Pfam Phospholipid-translocating ATPase N-terminal 41 108 IPR032631 -
Dod06g2747 875 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 867 - -
Dod06g2747 875 SUPERFAMILY Calcium ATPase, transmembrane domain M 48 415 IPR023298 -
Dod06g2747 875 SUPERFAMILY HAD-like 409 865 IPR036412 -
Dod06g2747 875 Gene3D - 575 687 IPR023299 GO:0000166
Dod06g2747 875 Gene3D - 116 287 - -
Dod06g2747 875 SUPERFAMILY Calcium ATPase, transduction domain A 149 285 IPR008250 -
Dod06g2747 875 Gene3D - 431 453 IPR023299 GO:0000166
Dod06g2747 875 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 868 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod06g2747 875 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Dod06g2747 875 Gene3D - 707 872 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2747 Dod-Chr6 58626912 58630484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2747 1 867 Primary Pumps ATPases AT1G17500 72.592 0.0 1306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2747 K01530 - gmx:100784621 1449.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1873 10 40197059 40202673 Dod06g2747 06 58626912 58630484 PCT