Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2739 ATGGGTGGTTCAGGAAGATGGCTCAAGTCACTCATTTCTCACAGAAAGCCCTCCACAAATGATCAAGAGAAGGGTGGTGATAAGAGTAAGAAGAAGTGGAAGCTATGGAGAAGTTCATCAGAAGGGTTTGGTTTAGGATCCTCCTCAACGAAGAAGAGGCATCACAATCACAAGGCATGTTCTTCGTTTGTGGTGATGGGTGATGAAGAAGAAGCGTTTAATGCTGCTGTGGCCACTGTGGTTAGAGCTCCACACAAAGATTTCGTGATGATCAAGCAGGAATGGGCTGCCATTCGCATTCAGACTGTGTTTCGAGGACTCTTGGCAAGGCGAGCTTTGAGGGCCTTGAGGGCAGTGGTGAGGCTGCAAGCTATATGCCGTGGAAGGAAAGTGAGAAAGCAAGCTGCTGTCACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCACATGTCAGGGCAAGGAATGTGAGAGAGTCTCCAGAAGGGAAATCTGTGCATAAACTGCTGGATGAGCATCGCAACCAAGCTGATCCTGTTGAGCAGGCCGAGCAAGGGTGGTGTGACATTCCAGGAACAGTAGAAGAAGTTAAAGCGAAATTACAAATGAGGAAAGAAGGAGCAATCAAGAGGGATAGAGCAATGGCATACTCTCTGGATAGCCAGCAATCAACTTTGTGTGCCAGTCCACACTCAAGAGTTTCCAAGCCAGTGACTCCTCGCAAGCACCTCAGCCTAGATAATAAGAGCGTGAGATCGAGCATGTTACAACGCTGGATGGCAACCGAGCCATGGGAGAGCCGGTCGACAGAAGAGATCTGTTTCGACTCACCTGACATGAGTCTGGTGTCCAGGAAATGTGATGATGATCTTGTTCTTCCCTTCAATTCATATCAACAAAGAGGCTTAGCCAAAGCAAGAAGTAATGGTGCAACATCCAGGACTTCTACCAAATCTCTCACAACTAGTCAATCAACTCCATCATCTTCTGGCATTAGCTCCGACTGCATGTATGATGATAGCCCTGCATCGACTCCATGTGCATCCGGATTGCTGCAGTCTACCAACAATGTAGTGGAGGAAGCAACAGATGAAAGAAATCTTCAGAAACCCAGCTACATGAATCTGACAGAATCAACCAGAGGTAAACTGAAAGCTTGCAGGCGCTCTTCTCAGAATTCAAAGAGACTCTTAATGGATGATTGCATCTCTCATAGCTCAAAAACAGAATTTCTAAAGGGAGATACTAGAAGCTGTTCTGGTTCTTATTCTTCAGTTAATTCATGGAACGATCTCTATGCAACACCTCTAAGGGCAAGTTACCAGAAACGATTTACCTTGGGAGGTAAGTAA 1353 0.4627 MGGSGRWLKSLISHRKPSTNDQEKGGDKSKKKWKLWRSSSEGFGLGSSSTKKRHHNHKACSSFVVMGDEEEAFNAAVATVVRAPHKDFVMIKQEWAAIRIQTVFRGLLARRALRALRAVVRLQAICRGRKVRKQAAVTLRCMQALVRVQAHVRARNVRESPEGKSVHKLLDEHRNQADPVEQAEQGWCDIPGTVEEVKAKLQMRKEGAIKRDRAMAYSLDSQQSTLCASPHSRVSKPVTPRKHLSLDNKSVRSSMLQRWMATEPWESRSTEEICFDSPDMSLVSRKCDDDLVLPFNSYQQRGLAKARSNGATSRTSTKSLTTSQSTPSSSGISSDCMYDDSPASTPCASGLLQSTNNVVEEATDERNLQKPSYMNLTESTRGKLKACRRSSQNSKRLLMDDCISHSSKTEFLKGDTRSCSGSYSSVNSWNDLYATPLRASYQKRFTLGGK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2739 450 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Dod06g2739 450 SMART iq_5 92 114 IPR000048 GO:0005515
Dod06g2739 450 SMART iq_5 115 136 IPR000048 GO:0005515
Dod06g2739 450 MobiDBLite consensus disorder prediction 302 336 - -
Dod06g2739 450 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Dod06g2739 450 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Dod06g2739 450 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 448 - -
Dod06g2739 450 MobiDBLite consensus disorder prediction 16 34 - -
Dod06g2739 450 Gene3D - 90 142 - -
Dod06g2739 450 PANTHER IQ-DOMAIN 5-RELATED 1 448 - -
Dod06g2739 450 MobiDBLite consensus disorder prediction 1 34 - -
Dod06g2739 450 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2739 Dod-Chr6 58470392 58473437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2739 1 433 IQD Protein Family AT1G72670 42.568 2.08e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2739 - - ahf:112710157 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1892 10 40513725 40516224 Dod06g2739 06 58470392 58473437 PCT