Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2727 ATGAACAACAACAACAACGTTGTTAACATCTCAACAAGAAACAGTGGTAACAGCAGCACCACCCAGGCTTGCGCTGCATGCAAGTACCAACGCAGGAAGTGCGCCCCTGACTGCATCCTGGCGCCTTATTTCCCCCACGACCGCCAGAGGCAGTTCCTCAACGCGCACAAGCTGTTCGGCGTGAGGAACATCACGAAGATCATCGAGTGCCTTGATTCTCACGACAAGGACATGGCCATGCGCAGCATAATCTTCCAATCTGACATGCGCGCCAACGACCCTGTCGGCGGTTGTTTCCGTTACATACAAGACCTGCAGACTCAGATCGAGTACTGCCGAGCCGAGCTTGAGCTGGTGCTTCAACACCTCGCCATCCTTAGAGCGCAGCAGGCTCATCAAAGTGTTTACGGTACAACAACAAATAATGGTGTTGGTGTTGGTGTTGGTGTCGGTGTCGGTATCAATGTCAACGTCAACGGTGACGATCATGTACTTGTGAATGCGGATCCTATGACATTGTACAATTCTTCTCCTACTGGTGGTGTTGGTGGTGGAAATAATTACCATTATATTCAGCACGTGCCGCCGCAGCAGCATGATCAGTACATGATGGTGCAAGAAGGGAATGACAGTAACAGTAGCAGCAACAACAATAATAATAATAATAATAATAATACACCTTTGCAAGAACATGTTAATATGTGGGCAATGCAGAATTCTCTGTCTTCATTGTCATTGCAGGGACAGAACAGTACTAATGGCAGTGTTGGTGATGAGTATGATCACAAGCCACTGCTTGAGATGGCTTCTGATGGGAGAAATGATATCGGATTTGAGCCCGAAGATTTAGTCCATCGCAGTGATGAAGCAGTTTTGTTTAAGATAGACGACGGGGTAATAAAAGCAGAGTCTGACTGCATGCAACAAGCTCAAGACCATGATCTCAAAGGTGCAGCAACTTTGTTTACTCTCACAAACTGTACTAGTTGA 990 0.4687 MNNNNNVVNISTRNSGNSSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITKIIECLDSHDKDMAMRSIIFQSDMRANDPVGGCFRYIQDLQTQIEYCRAELELVLQHLAILRAQQAHQSVYGTTTNNGVGVGVGVGVGINVNVNGDDHVLVNADPMTLYNSSPTGGVGGGNNYHYIQHVPPQQHDQYMMVQEGNDSNSSSNNNNNNNNNNTPLQEHVNMWAMQNSLSSLSLQGQNSTNGSVGDEYDHKPLLEMASDGRNDIGFEPEDLVHRSDEAVLFKIDDGVIKAESDCMQQAQDHDLKGAATLFTLTNCTS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2727 329 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 266 - -
Dod06g2727 329 MobiDBLite consensus disorder prediction 207 228 - -
Dod06g2727 329 Pfam Lateral organ boundaries (LOB) domain 23 118 IPR004883 -
Dod06g2727 329 ProSiteProfiles LOB domain profile. 22 123 IPR004883 -
Dod06g2727 329 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 17 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2727 Dod-Chr6 58358787 58360663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2727 22 133 AS2 family AT3G13850 73.214 1.46e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod06g2727 LOB 3.1e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2727 06 58358787 58360663 Dod06g2727 06 58358787 58360663 ECH
Dod10g1904 10 40600741 40601469 Dod06g2727 06 58358787 58360663 PCT