Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2719 ATGGCATATGTTAAGGCTCAGAAATCTAAGGCTTACTTCAAGAGGTATCAAGTGAAGTTCAAGAGAAGAAGAGAGGGAAAGACTGATTACCGAGCCAGGATTAGGTTGATCAACCAGGACAAGAACAAGTACAACACTCCAAAGTACCGCTTTGTTGTGCGATTTACAAACAAGGATATCATTGCACAAATAGTATCTGCTAGCATTGCTGGTGATATTGTTCTTGCAGCAGCATATTCACATGAACTGCCTTGCTATGGTCTTGAAGTAGGCCTTACTAACTATGCTGCAGCTTATTGCACTGGACTTCTCCTGGCCCGCCGAGTCCTTAAAATGCTTGAAATGGATGAGGAGTATGAAGGGAATGTAGAGGCTACCGGAGAGGATTTTTCTGTTGAACCTGGTGAGACCAGGAGGCCATTCCGTGCTCTCCTTGATGTCGGTCTTATTAGGACCACAACTGGAAACCGTGTGTTTGGTGCCCTCAAGGGAGCTTTGGATGGGGGTCTAGATATCCCTCACAGTGACAAAAGGTTTGCTGGTTTTGATAAGGAGAAGAAGGAGCTTGATCCTGAGGTTCACCGCAAATATATCTTTGGTGGACATGTCGCTGCCTACATGAAGGCACGGCCAAATATCTTATTTACTTTGATGGAAGACGAACCAGAGAAATACCAGTCACACTTCAGTGAATATATCAAGAAGGGAATAGAGGCTGATGGACTTGAGGCGCTGTACAAAAAGGTTCATGCTGCCATTCGTGCCGGTCCCACCATTAAGAAGTCAGAGAAGCAGCCACCAAAAGAACACAAGAGGTACAACCTGAAGAAGCTTACCTATGAGGAGAGGAAGGCTAAGTTGATTTCGCGCTTGCAGGCCCTCAACTCCGCAGCTGGTGCTGCTGACGAGGACGAGGACGAGGACGATGAGTGA 933 0.4652 MAYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSASIAGDIVLAAAYSHELPCYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYEGNVEATGEDFSVEPGETRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFDKEKKELDPEVHRKYIFGGHVAAYMKARPNILFTLMEDEPEKYQSHFSEYIKKGIEADGLEALYKKVHAAIRAGPTIKKSEKQPPKEHKRYNLKKLTYEERKAKLISRLQALNSAAGAADEDEDEDDE* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2719 310 SUPERFAMILY Translational machinery components 11 259 - -
Dod06g2719 310 PANTHER PROTEIN L5, PUTATIVE-RELATED 1 306 - -
Dod06g2719 310 PANTHER RIBOSOMAL PROTEIN L5-RELATED 1 306 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Dod06g2719 310 Pfam Ribosomal L18 C-terminal region 242 295 IPR025607 -
Dod06g2719 310 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 14 175 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Dod06g2719 310 CDD Ribosomal_L18_L5e 41 170 - -
Dod06g2719 310 Gene3D - 1 298 - -
Dod06g2719 310 PRINTS Ribosomal protein L5 signature 144 163 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Dod06g2719 310 PRINTS Ribosomal protein L5 signature 43 62 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Dod06g2719 310 PRINTS Ribosomal protein L5 signature 164 183 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Dod06g2719 310 PRINTS Ribosomal protein L5 signature 84 104 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Dod06g2719 310 PRINTS Ribosomal protein L5 signature 20 39 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Dod06g2719 310 Hamap 50S ribosomal protein L18 [rplR]. 14 253 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2719 Dod-Chr6 58267617 58270323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2719 1 299 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 81.271 0.0 500