Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2711 ATGGATGAAAAGCCTATGCTCCTCCATGGAACAATTGAAGCTACCATCTTCAATGCCTCACCTTATTCTCCTTTATTTCCCTTCAGTTGTATATGTAAAAAAAATGGAAAACCTGCTTATGTGACCATCAAGATCGAAAACAAAAAGGTTGCAAAAACAAGTGAAGACAGTGACCGTGTGTGGAACCAAACATTTCAGATTCAATGTGCTCACCCAATTGATTCAACTATAACCATTACACTGAAAACATCAAGTTCCACATTAGGTAAATTCCATATCAAGGCCAAGCAGCTATTGAATGAAGGAAGTTTGATCAATGGATTCTTCCCTCTCCTCATGGAAGATGGAAAACCAAACAAAAAGCTTAGATTAAAGCTTATAGTATGGTTCAAGCCAGCAGAATTGGAACCAAGTTGGGGAGAGGTAATAGGCAATGGGGAATCTCAAGGGTTGATGGATGCTACATTCCCACAAAGGTCCAATTGTCATGTCAAACTTTATCATGATGCTCACCATTCTTCTACTTTCCAACCTCCCTATAATCCATGTGGAACTCCAAGAAAGCTATGGGAGGATGTCTATAAGGCCATTGAGGGTGCAAAGTATATAATTTACATTGCAGGCTGGTCCTTCAATCCCAAGATGGTTCTGGTTCGAGATCCTCACACAGAAATCCCACATGCCAGAGGAGTAAAGCTTGGTGAGCTATTGAAGAAGAAGGCAGAGGAAGGAGTAGCTGTGAGGATTATGATTTGGGATGATGAAACATCTTTGCCCATTATTAAGAACAAAGGAACAATGAACACACATGATGAGGATGCTTTTGCTTACTTCAGCCACACTAAAGTTATATGCAGAAAATGTCCAAGATTGCACCATAAGTTCCCAACACTCTTTGCTCACCATCAAAAGACTATAACAGTTGACACCCCTGCACCTAACTCTGGTAATGAAAGAGAACTTATCAGCTTTTTGGGAGGGTTGGACCTTTGTGAAGGCAGATATGACACTGAGCAACATTCATTGTTTCGAACACTCATCAGGGAATCTCATTGTTATGACTTTTACCAAACAAACATTGAAGGAGCAAGCCTCAACAAAGGAGGGCCAAGAGCGCCTTGGCATGATGCTCATGCTTGTGTCACTGGTGAGGCAGCTTGGGATGTGTTAACCAATTTTGAACAAAGATGGACAAAGCAATGTGATCCTTCTCTTCTAGTCCCTTCTAACACATTAGTAAATGTTGTCCCTAGGACAACCTCAAGCTCTTCCTTAGAGAAGAATTGGAAAGTTCAAGTATATAGGTCAATTGATCATGTGTCTGCTAGCTTGCTAAGCCAGTCATTTAGAAAATTAAGTGTGGAAAGGAGCATCCATGAGGCTTATGTTGAAGCAATTAGGTGTGCTGAAAGGTTTATATACATTGAAAACCAATATTTCATTGGGGGGTGCCATTTGTGGGAGAAAGATGGGCATTGTGGCTGCACAAATCTGATTCCTATTGAAATTGCACTCAAGGTGGTCAGCAAGATCAAAGCAAAAGAGAGGTTTGCAGTGTACATAATCATACCAATGTGGCCGGAAGGAGTGCCTGAAAGTGAAACAGTTCAAGATATATTGCACTGGACTAGAGAAACAATGGCTATGATGTATAGGTTGATTGGAGATGCAATAATAGAAAGTGGTGAACCAGGGCACCCAAGAGATTACTTGAATTTCTTCTGCCTTGCAAATAGGGAACAGAGGGGAAAAGGGGAGTATCTTCCACTACATTCTCCCCATCCTGAAACACAATATTGGAATGCACAAAAACATAGGAGGTTCATGGTTTATGTCCACTCCAAGTTCATGATAGTGGACGATCTATACATATTAATAGGATCAGCCAATGTGAACCAAAGATCCATGGATGGGGAAAGGGACACTGAGATTGCCATAGGGTGCTACCAATCTCAAAATGAAAATGATAACCAAATGATGAGCCTTGGTGATATTCATGCATACAGAATGTCATTATGGTATGAGCACACTGGTAGTGCCAATGATTTGTTCCTAGAGCCACAAAGTTTGGAATGTGTGAAAATGATGCTCTCAATGGGAGATCAAATGTTGGACATTTACACAAGTGAAGAAATTGTGGGCATGGAAGGTGTGCACCTTGTAACTTACCCTGTGAGGGTGACACAAGAAGGGTATGTGAAGACCCTGAATGATGGAGCTCATTTTCCTGATACAAGTTCTCCAGTCAAGGGGAAGAGATCTAAAATGTTGCCCCCTATCTTTACAACTTAG 2292 0.411 MDEKPMLLHGTIEATIFNASPYSPLFPFSCICKKNGKPAYVTIKIENKKVAKTSEDSDRVWNQTFQIQCAHPIDSTITITLKTSSSTLGKFHIKAKQLLNEGSLINGFFPLLMEDGKPNKKLRLKLIVWFKPAELEPSWGEVIGNGESQGLMDATFPQRSNCHVKLYHDAHHSSTFQPPYNPCGTPRKLWEDVYKAIEGAKYIIYIAGWSFNPKMVLVRDPHTEIPHARGVKLGELLKKKAEEGVAVRIMIWDDETSLPIIKNKGTMNTHDEDAFAYFSHTKVICRKCPRLHHKFPTLFAHHQKTITVDTPAPNSGNERELISFLGGLDLCEGRYDTEQHSLFRTLIRESHCYDFYQTNIEGASLNKGGPRAPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSLLVPSNTLVNVVPRTTSSSSLEKNWKVQVYRSIDHVSASLLSQSFRKLSVERSIHEAYVEAIRCAERFIYIENQYFIGGCHLWEKDGHCGCTNLIPIEIALKVVSKIKAKERFAVYIIIPMWPEGVPESETVQDILHWTRETMAMMYRLIGDAIIESGEPGHPRDYLNFFCLANREQRGKGEYLPLHSPHPETQYWNAQKHRRFMVYVHSKFMIVDDLYILIGSANVNQRSMDGERDTEIAIGCYQSQNENDNQMMSLGDIHAYRMSLWYEHTGSANDLFLEPQSLECVKMMLSMGDQMLDIYTSEEIVGMEGVHLVTYPVRVTQEGYVKTLNDGAHFPDTSSPVKGKRSKMLPPIFTT* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2711 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 608 635 IPR001736 GO:0003824
Dod06g2711 763 Gene3D Endonuclease Chain A 172 430 - -
Dod06g2711 763 PANTHER PHOSPHOLIPASE D ALPHA 4 763 - -
Dod06g2711 763 Pfam Phospholipase D Active site motif 611 635 IPR001736 GO:0003824
Dod06g2711 763 PIRSF PLD_plant 2 763 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Dod06g2711 763 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 125 IPR035892 -
Dod06g2711 763 Pfam C2 domain 39 111 IPR000008 -
Dod06g2711 763 SUPERFAMILY Phospholipase D/nuclease 155 409 - -
Dod06g2711 763 Gene3D Endonuclease Chain A 450 658 - -
Dod06g2711 763 SMART pld_4 297 334 IPR001736 GO:0003824
Dod06g2711 763 SMART pld_4 608 635 IPR001736 GO:0003824
Dod06g2711 763 PANTHER PHOSPHOLIPASE D 4 763 IPR015679 -
Dod06g2711 763 Pfam Phospholipase D C terminal 682 752 IPR024632 -
Dod06g2711 763 SUPERFAMILY Phospholipase D/nuclease 424 693 - -
Dod06g2711 763 Gene3D C2 domain 29 130 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2711 Dod-Chr6 58152414 58156518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2711 30 763 Phospholipase D Gene Family (Wang group) AT1G55180 62.350 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2711 K01115 - gmx:100812642 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2711 06 58152414 58156518 Dod06g2711 06 58152414 58156518 ECH
Dod10g1921 10 40854825 40857877 Dod06g2711 06 58152414 58156518 PCT