Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2708 ATGAGTCGAGAGCAGCAGAAGGGAGGGAAGCGAGAGAAAGGCTCCGATGGCGCCGAGAAGGTTATTGTTGCTGTTAAGGCGTCAAGGGAAATCCCAAGGACTGCTCTTGTTTGGTCCCTCACTCATGTTGTTCAGCCTGGAGATTGCATTACACTGCTAGTTGTTGTGCCTTCACAAAGTTCAGGCAAAAGATTATGGGGTTTTCCAAGATTTGCTGGTGACTGTGCCAGTGGCAGTAAGAAGTACCCTCCAGGAACAGTTTCAGAGCAGAAGAGTGATATCACTGATTCTTGTTCTCAGATGATCCTTCAGCTCCACGACGTCTATGATCCAAACAAGATAAATGTCAGGATTAAAATTGTTTCCGGATCGCCTTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGCTCAAGCCAATTGGGTCGTATTAGACAAACAGCTCAAACATGAAGAAAAGCGATGCATGGAAGAGCTGCAGTGTAACATTGCGGTTATGAAGCGTTCCCAGCCTAAAGTACTCCGCTTGAATTTGATTGGATTGCAAAAGAAGGATGTTGAAGAAGTAAGTGCATCACCTTCTGAGCAAGAAGAGTTGCCGCCTGAAAAGCGCAGCAAAAAGAGGAATGATTCTTTGAATTCCATCAAGGGACCATCTGTCACTCCAATTAGCAGCCCAGAGCTAGGGACTCCATTTACCGCAACGGAAGCTGGCACCTCATCGGTTTCAAGCTCTGATCCAGGAACCTCACCATTCTTTATCTCAGAGATAAACAGTGAGCCAAAGAAAGAGGAGACTATCAATGAAAATCAAGAACTTGATGATACTAATTCAGACACAGAAAGTGAAAGTTTGTCCACGTCTTCGGCAAGCTTGAGATTCCAGCCGTGGATCACAGAATTACTTCTGCATCAACAATCATCACAACGCAACGAAGAAAGACCAGAGATATCTCATGATATGCCTCAAGCATCTACAACCAGAGCTTTGCTAGAGAAGTTTTCAAGGCTTGATATAGGATCTGGAATTGAAATCTCAACCTATAGAAATGACTCAGATTTCAGTGGAAATTTAAGGGAAGCAATAGCATTGTCTAGAAATGCCCCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAATTAGAACTCGCCACTGGTGGATTCTCAGAGGCCAATTTCTTAGCAGAAGGAGGATTCGGATCAGTTCATAGAGGGGTTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAATTCTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCATCGAAATGTTGTTATGCTGATCGGATTCTGTATAGAGGATAAGAGAAGGCTACTAGTTTATGAGTACATATGCAATGGATCCTTGGATTCACATTTATATGGGAGACAACAGGAAACCTTGGAATGGTCTGCAAGGCAAAAAATTGCTGTTGGAGCTGCTCGCGGATTACGATATCTTCATGAAGAATGCAGAGTTGGTTGCATTATCCACCGTGACATGCGACCAAACAACATTCTCATAACACATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGATGGAGACACAGGTGTGGAGACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATACGCTCAAAGTGGCCAAATAAGTGAAAAAGCTGATGTTTATTCATTTGGGGTGGTATTAGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCACTCGGCCCAAGGGACAGCAATGTCTTACTGAGTGGGCACGACCACTGTTAGAAGATTGTGCCATTGAGGAGCTGATTGATCCAAGGCTGGAGAACCACTATTCAGAAAATGAAGTCTGTTGCATGTTGCATGCTGCATCATTATGCATTCGGCGAGATCCTCATTCTAGGCCACGCATGTCACAGGTTCTCCGAATACTAGAGGGCGACATGGTGATGGACGCAGGTTACATTTCAACTCCAGGATATGATGCTGGGAACCGGAGTGGTCGACTCTGGTCAGAGCCGCTGCAGAGGCAGCACCATTACAGTGGTCCCTTGTTAGAAGAGTCACTGGAATCATTCAGTGGAAAGCTATCTCTTGACAAATACAGGCCTGCATATTGGGACAGGGACAAGGCGAATAAAAGGACTTCATGTGAAGATGACATTTGA 2256 0.4521 MSREQQKGGKREKGSDGAEKVIVAVKASREIPRTALVWSLTHVVQPGDCITLLVVVPSQSSGKRLWGFPRFAGDCASGSKKYPPGTVSEQKSDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIAVMKRSQPKVLRLNLIGLQKKDVEEVSASPSEQEELPPEKRSKKRNDSLNSIKGPSVTPISSPELGTPFTATEAGTSSVSSSDPGTSPFFISEINSEPKKEETINENQELDDTNSDTESESLSTSSASLRFQPWITELLLHQQSSQRNEERPEISHDMPQASTTRALLEKFSRLDIGSGIEISTYRNDSDFSGNLREAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSEANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQQETLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQISEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEDCAIEELIDPRLENHYSENEVCCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDAGYISTPGYDAGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYRPAYWDRDKANKRTSCEDDI* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2708 751 Pfam Protein kinase domain 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2708 751 PANTHER OS01G0253100 PROTEIN 16 709 IPR045271 GO:0004714|GO:0006468
Dod06g2708 751 Gene3D Phosphorylase Kinase; domain 1 376 479 - -
Dod06g2708 751 Gene3D Transferase(Phosphotransferase) domain 1 480 683 - -
Dod06g2708 751 SUPERFAMILY Protein kinase-like (PK-like) 388 678 IPR011009 -
Dod06g2708 751 Coils Coil 262 282 - -
Dod06g2708 751 ProSitePatterns Tyrosine protein kinases specific active-site signature. 525 537 IPR008266 GO:0004672|GO:0006468
Dod06g2708 751 ProSiteProfiles Protein kinase domain profile. 404 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2708 751 MobiDBLite consensus disorder prediction 196 210 - -
Dod06g2708 751 CDD USP_Like 20 143 - -
Dod06g2708 751 MobiDBLite consensus disorder prediction 185 288 - -
Dod06g2708 751 CDD STKc_IRAK 410 676 - -
Dod06g2708 751 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 709 - -
Dod06g2708 751 MobiDBLite consensus disorder prediction 211 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2708 Dod-Chr6 58122782 58129010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2708 384 678 Trihelix Transcription Factor Family AT1G70460 53.488 4.86e-103 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dod06g2708 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2708 - - gmx:100816340 1342.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2708 06 58122782 58129010 Dod06g2708 06 58122782 58129010 ECH
Dod10g1924 10 40894821 40901107 Dod06g2708 06 58122782 58129010 PCT