Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2706 ATGGCTTACTATGGTAACACAACAGGGAATTTCCCATGGATTTGTTTGAAAGATTTTGATTTTAGTTCTCTATGTATTCAAAGGAGCATAGTAGACACTACAAATCTACTTTTTGTTTGTATCTTCTACACATCATTGTTTATCAGTTTTGTGAGAAGATGTTCAGCAAGTTGCAGCTACAGGAGGAACTTGGTTTTCACACTTGTAGCAATCTGCTGTTGTCTTGTTAGCATTGGTTTCTTCAGTATTGGCCTGTGGAATCTCATAGCCGAAACTGGTAGCAGTAACACTAAGCAGCTGAGCTGGTTGTCTTGCATTGTCAGAGGATTTGTTTGGATTTCATTTGCAGCTTCCTTGCTTGTTCAGGGATGCAAATGGATAAAGATTCTAAACTCAGTTTGGTGGACATCTTCTTGTGTATTAGTCTCAGCCCTCAACATTGAAGTTCTGTTCAAAGAGCATGCAATTGAAGTTCTTGATGTGGTACAGTGGCTCGCACACTTGTTACTTCTCTTCTGTGCCTTGCAAAATCTTGGTTGTTTTGTCAGTCTAAGTAATCGAGATGATGCAATTTTATCTGCGCCTCTCTTAGCTCAGAAAGGTGAAAACAAACAAACAGGACTAGGCCATGCTACCCTTCTAAGCAAGTTGATTTTCTCTTGGGTTGACCCTTTACTCAATTTGGGTTACTCAAAGCCACTAGCTCTTGAAGACATCCCTTCACTTGTTCCTGAAGATGAAGCAGACTCAGCATACCAAAAGTTTGTGCTTGCATGGGAATCACTTTCAAGGGAGAGGACCAATACCAATACCATAAACTTGGTTCTTTGGTGTGTGGTTAGAGTTTACTTAAAAGAGAACATGTTAATAGCATTTTATGCATTGATCAGAACCATTTGTGTTGTGGTTTCTCCTTTAATACTCTATGCTTTTGTGAACTACTCAAATAGAAATAGCACTGATGCAGATCTCAAGGATGGTCTTTCCATATTAGGATTCCTGATTCTCACAAAAGTGCTTGAGTCTTTTTCCCAAAGACATTGTTATTTTGATTCAAGAAGGTCAGGAATGAAAATGAGATCAGCCCTGATGGTGGCAGTGTATCAAAAACAGCTAAAGCTATCTAGCTCGTCAAGAAAAAGGCATTCGGCCGGCGAAATCGTGAACTACATTGCAGTTGATGCATACAGAATGGGAGAGTTTCCATGGTGGTTTCACGTAACATGGACTTCAGCAGTGCAGCTTTTTCTATCTATTGGTGTACTTTTTGGTGTTGTGGGTCTTGGTGCTCTTCCTGGATTAGTCCCTTTCATAATTTGTGGACTTCTCAATGTACCCTTTGCAAAGATACTAACAAATTGTCAAGCACAACTCATGGTAGCACAAGATGAGCGCCTAAGATCAACTTCAGAAATTCTAAATAGCATGAAGATCATTAAGTTACAATCATGGGAAGATAAGTTCAGGAGCTTGGTTGAGTCCCTAAGGGCTAAAGAGTTCAAATGGTTGTCTAAGATACAGATCCTTAAGGCTTTTGGATCATTTCTATATTGGATGTCCCCAACCATTGTCTCTTCTGTTGTTTTCCTTGGATGTGTACTTTTCCATAGTGCTCCATTGAATGCAGCAACGATTTTCACTATTCTTGCAACTTTGAGGACATTGGCCGAACCTGTTAGGATGATCCCTGAGGCCTTATCTATTCTGATCCAAGTTGTGGTATCCTTTGATCGTCTCAATACTTTTTTGCTTGATGAAGAGCTGAACAGTGATGACAATGTGAGGAGTGTAAAGCAATGTTCAGTTAATAGCAATGCAGTGGACATTCAAGCTGGCAACTTTACTTGGGACCAGGAGTCAGTGCTCCTAACTATGGCTGATGTGAACTTAGACGTCAAATGGGGACAGAAAGTAGCAGTTTGCGGGCCAGTTGGAGGTGGAAAATCCTCACTTTTGCATGCAGTTCTAGGAGAGATTCCCAGGATCTCAGGAACTGTTACTGTATGTGGCACCATAGCCTATGTTTCTCAAACTTCCTGGATACAAAGTGGAACATTTAGAGATAATATACTCTTTGGCAAGCCAATGGACAAAACAAGATATGAGAACGCCATTAAGGTTTGTGCCTTAGATAAGGATATTAATGAATTCAGCCATGGTGATCTCACAGAAATTGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAACAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCTGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCACACACTGCTGCTATTCTATTTAATGAATGTGTCATGACTTCTCTAAGAGATAAAACAGTCATTCTAGTGACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATAAAATCCTGGTAATTGAGGGAGGAAAGATTACTCAACAAGGTAGTTATGGTGATCTCCTGACAGCCGGAACTGCATTTGAACAACTTGTGAGTGCACATAAAGATGCAATATCAGAGTTGGACCAAGGCAATGAAAACAAAGGAGGTGCTGACAATGAGGCTATGGTTCATTCAGTGGAGTCTCAAGGTTCTTTTCTATCTAAAAATCAAAGTGAGGGGGATATTTCTATCAAGGGTCAACTTGGGGCACAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATCTTGGGTGGAACCCATTCTGGGATTACCTTTCTTTTTCTAATGGGGCATTCATGCTGTGTTTGGTGATATTATCACAATCCGCTTTTGTTGGTTTACAGGCTGCTGCTACTTTTTGGCTTGCTCTAGCCATTGAAAGACCAAAAATAACTAGTGGCTCTCTGATTGGAGTTTACTCCTTAATTTCATGTTTTAGTGCTGTGTTTGTGTATGTGAGGTCCTTATTAGCTGCACATCTTGGGCTAAAAGCTTCATCAGCTTTCTTCTCAAATTTCACTAAGGCTATCTTCAATGCTCCTATGCTGTTCTTTGACTCAACCCCTGTAGGAAGAATTTTAACCCGAGCTTCATCAGATTTGAGTATTGTGGACTTTGATATACCTTATGCCATCACCTTTGTAGCATCTATAGCCATTGAAATTGCGGTGATAATTTGTATAATGGCTTCAGTCACATGGCAAGTTCTAATTGTTGCAATACCTGCTATGGTTGCATCAAAATATGTTCAGGGATATTATCAACCCTCTGCACGGGAACTAATAAGGATCAATGGAACCACAAAAGCTCCAGTCATGAACTTTGCAGCTGAGACATCACTTGGAGTGGTAACTGTTAGAGCATTCAACATGGTGGACAGATTTGCCAAAAACTACCTTAAGCTTGTGGACACTGATGCAACACTATTCTTTCATTCTAATGTGACCATGGAATGGTTGGTTTTAAGGATTGAAGCACTTCAAAACTTGACAGTCTTCACTGCAGCCTTGTTACTTATTCTAGTTCCTATGGGATATGTGTCCCCAGGCCTTGTGGGACTGTCTCTTTCTTATGCTTTCACATTGACACAAGCACAAATCTTTTGGACCAGATGGATTTGCAACTTATCAAACTATGTTATCTCTATTGAAAGAATCAAGCAATTCATTCATATACCAGCTGAACCTCCTGCCATTGTGGAGGATAACAGGCCTCCATCTTCATGGCCTTGGAAGGGTAGGATTGATCTTCAAGCCTTAGAGATCAGATATCGTCCAAATGCTCCACGAGTTCTTAAGGGCATCACTTGCACATTCAAAGAAGGGAACAGAGTGGGAGTTGTAGGAAGGACTGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGCTTGGTTGAGCCTTCAAAAGGTAATATTCTTATTGACGGGATTGACATGTGCTCAATTGGGTTGAAAGATTTGAGAATGAAGCTAAGCATTATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACAAACATGGACCCTTTAGGCCTATACTCAGATGATGACATATGGCAGGCTTTAGAGAAATGTCAGCTCAAGGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTTCAGTGAGTGATGAAGGTGGAAATTGGAGCTTAGGACAGCGCCAACTGTTTTGTCTTGGAAGAGTACTACTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCATCAATTGACGCTGCTACTGATGCCATTCTACAACGAGTTATTAGGCAAGAATTTGCAGAATGCACAGTAATAACCGTGGCTCACAGAGTTCCAACCGTTATAGATAGTGACATGGTCATGGTCCTATCATATGGGAAACTGGTGGAATATGATGAGCCTTCAAAGCTTATGGAGACAAACTCCTCATTCTCTAAGCTGGTAGCTGAATATTGGTCCAGCTGCAGGAAGAATTCCTCCCCAAATCTAAGCGGGCAACAACCATGA 4437 0.4082 MAYYGNTTGNFPWICLKDFDFSSLCIQRSIVDTTNLLFVCIFYTSLFISFVRRCSASCSYRRNLVFTLVAICCCLVSIGFFSIGLWNLIAETGSSNTKQLSWLSCIVRGFVWISFAASLLVQGCKWIKILNSVWWTSSCVLVSALNIEVLFKEHAIEVLDVVQWLAHLLLLFCALQNLGCFVSLSNRDDAILSAPLLAQKGENKQTGLGHATLLSKLIFSWVDPLLNLGYSKPLALEDIPSLVPEDEADSAYQKFVLAWESLSRERTNTNTINLVLWCVVRVYLKENMLIAFYALIRTICVVVSPLILYAFVNYSNRNSTDADLKDGLSILGFLILTKVLESFSQRHCYFDSRRSGMKMRSALMVAVYQKQLKLSSSSRKRHSAGEIVNYIAVDAYRMGEFPWWFHVTWTSAVQLFLSIGVLFGVVGLGALPGLVPFIICGLLNVPFAKILTNCQAQLMVAQDERLRSTSEILNSMKIIKLQSWEDKFRSLVESLRAKEFKWLSKIQILKAFGSFLYWMSPTIVSSVVFLGCVLFHSAPLNAATIFTILATLRTLAEPVRMIPEALSILIQVVVSFDRLNTFLLDEELNSDDNVRSVKQCSVNSNAVDIQAGNFTWDQESVLLTMADVNLDVKWGQKVAVCGPVGGGKSSLLHAVLGEIPRISGTVTVCGTIAYVSQTSWIQSGTFRDNILFGKPMDKTRYENAIKVCALDKDINEFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNECVMTSLRDKTVILVTHQVEFLSEVDKILVIEGGKITQQGSYGDLLTAGTAFEQLVSAHKDAISELDQGNENKGGADNEAMVHSVESQGSFLSKNQSEGDISIKGQLGAQLTQEEEKEIGDLGWNPFWDYLSFSNGAFMLCLVILSQSAFVGLQAAATFWLALAIERPKITSGSLIGVYSLISCFSAVFVYVRSLLAAHLGLKASSAFFSNFTKAIFNAPMLFFDSTPVGRILTRASSDLSIVDFDIPYAITFVASIAIEIAVIICIMASVTWQVLIVAIPAMVASKYVQGYYQPSARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFAKNYLKLVDTDATLFFHSNVTMEWLVLRIEALQNLTVFTAALLLILVPMGYVSPGLVGLSLSYAFTLTQAQIFWTRWICNLSNYVISIERIKQFIHIPAEPPAIVEDNRPPSSWPWKGRIDLQALEIRYRPNAPRVLKGITCTFKEGNRVGVVGRTGSGKTTLISALFRLVEPSKGNILIDGIDMCSIGLKDLRMKLSIIPQEPTLFKGSIRTNMDPLGLYSDDDIWQALEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDAATDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSCRKNSSPNLSGQQP* 1479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2706 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 829 IPR027417 -
Dod06g2706 1478 Pfam ABC transporter 1243 1391 IPR003439 GO:0005524
Dod06g2706 1478 SUPERFAMILY ABC transporter transmembrane region 276 585 IPR036640 GO:0005524|GO:0016021
Dod06g2706 1478 CDD ABC_6TM_ABCC_D1 289 579 IPR044746 GO:0140359
Dod06g2706 1478 SUPERFAMILY ABC transporter transmembrane region 910 1208 IPR036640 GO:0005524|GO:0016021
Dod06g2706 1478 CDD ABCC_MRP_domain1 607 807 - -
Dod06g2706 1478 Pfam ABC transporter transmembrane region 289 555 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2706 1478 Pfam ABC transporter transmembrane region 942 1176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2706 1478 Gene3D - 581 852 IPR027417 -
Dod06g2706 1478 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 289 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2706 1478 CDD ABC_6TM_ABCC_D2 908 1201 IPR044726 GO:0140359
Dod06g2706 1478 Pfam ABC transporter 627 759 IPR003439 GO:0005524
Dod06g2706 1478 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 65 1471 - -
Dod06g2706 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1215 1459 IPR027417 -
Dod06g2706 1478 Gene3D ABC transporter type 1, transmembrane domain 876 1207 IPR036640 GO:0005524|GO:0016021
Dod06g2706 1478 SMART AAA_5 1252 1444 IPR003593 -
Dod06g2706 1478 SMART AAA_5 634 807 IPR003593 -
Dod06g2706 1478 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 914 1176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2706 1478 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 830 IPR003439 GO:0005524
Dod06g2706 1478 Gene3D - 1209 1460 IPR027417 -
Dod06g2706 1478 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1228 1460 IPR003439 GO:0005524
Dod06g2706 1478 ProSitePatterns ABC transporters family signature. 732 746 IPR017871 GO:0005524
Dod06g2706 1478 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 65 1471 - -
Dod06g2706 1478 Gene3D ABC transporter type 1, transmembrane domain 276 580 IPR036640 GO:0005524|GO:0016021
Dod06g2706 1478 CDD ABCC_MRP_domain2 1224 1444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2706 Dod-Chr6 58025683 58033027 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2706 583 871 Calmodulin-binding Proteins AT2G36910 25.246 2.83e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2706 - - gmx:100784827 2239.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2706 06 58025683 58033027 Dod06g2706 06 58025683 58033027 ECH