Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2702 ATGGCTTACTATGGTAACACAACAGGGAATTTCCCATGGATTTGTTTGAAAGATTTTGATTTTAGTTCTCTATGTACTCAAAGGAGCATAGTGGACACTACAAATCTACTTTTTGTTTGTATCTTCTACACATCATTGTTTATCAGTTTTGTGAGAAGATGTTCAGCAAGTTGCAGCTACAGGAGGAACTTGGTTTTCACACTTGTAGCAATCTGCTGTTGTCTTGTTAGCATTGGTTTCTTCAGTATTGGCCTGTGGAATCTCATAGCCGAAACTGGTAGCGGTAACACTAAGCAGCTGAGCTGGTTGTCTTGCATTATCAGAGGATTTGTTTGGATTTCATTTGCAGCTTCCTTGCTTGTTCAGGGATGCAAATGGATAAAGATTCTAAACTCAGTTTGGTGGACATCTTCTTGTGTATTAGTCTCAGCCCTCAACATTGAAGTTCTGTTCAAAGAGCATGCAATTGAAGTTCTTGATGTGGTACAGTGGCTTGTACACTTGTTACTTCTCTTCTGTGCCTTGCAAAATCTTGGTTGTTTTGTCAGTCAAAGTAATCCAGATGATGCAATTTTATCTGAGCCTCTCTTAGCTCAGAAAGGTGAAAACAAACAAACAGGACTAGGCCATGCTACCCTTCTAAGCAAGTTGATTTTCTCTTGGGTTAACCCTTTACTCAATTTGGGTTACTCAAAGCCACTAGCTCTTGAAGACATCCCTTCACTTGTTCCTGAAGATGAAGCAGACTCAGCATACCAAAAGTTTGTGCTTGCATGGGAATCACTTTCAAGGGAGAGGACCAATACCAATACCAAAAACTTGGTTCTTTGGTGCGTGGTTAGAGTTTACTTAAAAGAGAACATGTTAATAGCATTTTATGCATTGATCAGAACCATTTGTGTTGTGGTTTCTCCTTTAATACTCTATGCTTTTGTGAACTACTCAAATAGAAATAGCACTGATGCAGATCTCAAGGATGGTCTTTCCATATTAGGATTCCTGATTCTCACAAAAGTGCTTGAGTCTTTTTCCCAAAGGCATTGTTATTTTGATTCAAGAAGGTCAGGAATGAAAATGAGATCAGCCCTGATGGTGGCAGTGTATCAAAAACAGCTAAAGCTATCTAGCTCGTCAAGAAAAAGGCATTCGGCCGGCGAAATCGTGAACTACATTGCAGTTGATGCATACAGAATGGGAGAGTTTCCATGGTGGTTTCACGTAACATGGACTTCAGCAGTGCAGCTTTTTCTATCTATTGGTGTACTTTTTGGTGTTGTGGATCTTGGTGCTCTTCCTGGATTAGTCCCTTTCATAATTTGTGGACTTCTCAATGTACCCTATGCAAAGATACTAACAAATTGTCAAGCACAACTCATGGTAGCACAAGATGAGCGCCTAAGATCAACTTCAGAAATTCTAAATAGCATGAAGATCATTAAGTTACAATCATGGGAAGATAAGTTCAGGAGCTTGGTTGAGTCCCTAAGGGCTAAAGAGTTCAAATGGTTGTCTAAGATACAGATCCTTAAGGCTTTTGGATCATTTCTATATTGGATGTCCCCAACCATTGTCTCTTCTGTTGTTTTCCTTGGATGTGTACTTTTCCATAGTGCTCCATTGAATGCAGCAACGATTTTCACTATTCTTGCAACTTTGAGGACATTGGCCGAACCTGTTAGGATAATCCCTGAGGCCTTATCTATTCTAATCCAAGTTGTGGTATCCTTTGATCGTCTCAATACTTTTTTGCTTGATGAAGAGCTGAACAGTGATGACAATGTGAGGAGTGTAAAGCAATGTTCAGTTAATAGCAATGCAGTGGACATTCAAGCTGGCAACTTTACTTGGGACCAGGAGTCAGTGTTCCTAACTATGGCTGATGTGAACTTAGACGTCAAATGGGGACAGAAAGTAGCAGTTTGTGGGCCAGTTGGAGGTGGAAAGTCCTCACTTTTGCATGCAGTTCTAGGAGAGATTCCCAGGATCTCAGGAACTGTTAATGTATGTGGCACCATAGCCTATGTTTCTCAAACTTCCTGGATACAAAGTGGAACATTTAGAGATAATATACTCTTTGGCAAGCCAATGGACAAAACAAGATATGAGAATGCCCTTAAGGTTTGTGCCTTAGATAAGGACATTAATGAATTCAGCCATGGTGATCTCACAGAAATTGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAACAAAGGATTCAACTAGCTAGAGCGGTCTACAATGATGCTGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCACACACTGCTGCTATTCTATTTAATGAATGTGTCATGACTTCTCTAAGAGATAAAACAGTCATTCTAGTGTCTCATCAAGTGGAGTTTCTCTCAGAAGTTGATAAAATCCTGGTAAAGTATCTCCATTTTGGTGTTCAATTAGACCCCATTTGGCTAAGGTGCTTAATAAGTCCTTATGTAAAAAGGGCTTCTTATATAAGGACTTGTATAAAAAGTAATTTACAAGAACATTATTTTGTGTTTGGAAGCACATTAACAGTGCTTATTTTGGTTTGTAGTGCTTGCTCTTAG 2583 0.3961 MAYYGNTTGNFPWICLKDFDFSSLCTQRSIVDTTNLLFVCIFYTSLFISFVRRCSASCSYRRNLVFTLVAICCCLVSIGFFSIGLWNLIAETGSGNTKQLSWLSCIIRGFVWISFAASLLVQGCKWIKILNSVWWTSSCVLVSALNIEVLFKEHAIEVLDVVQWLVHLLLLFCALQNLGCFVSQSNPDDAILSEPLLAQKGENKQTGLGHATLLSKLIFSWVNPLLNLGYSKPLALEDIPSLVPEDEADSAYQKFVLAWESLSRERTNTNTKNLVLWCVVRVYLKENMLIAFYALIRTICVVVSPLILYAFVNYSNRNSTDADLKDGLSILGFLILTKVLESFSQRHCYFDSRRSGMKMRSALMVAVYQKQLKLSSSSRKRHSAGEIVNYIAVDAYRMGEFPWWFHVTWTSAVQLFLSIGVLFGVVDLGALPGLVPFIICGLLNVPYAKILTNCQAQLMVAQDERLRSTSEILNSMKIIKLQSWEDKFRSLVESLRAKEFKWLSKIQILKAFGSFLYWMSPTIVSSVVFLGCVLFHSAPLNAATIFTILATLRTLAEPVRIIPEALSILIQVVVSFDRLNTFLLDEELNSDDNVRSVKQCSVNSNAVDIQAGNFTWDQESVFLTMADVNLDVKWGQKVAVCGPVGGGKSSLLHAVLGEIPRISGTVNVCGTIAYVSQTSWIQSGTFRDNILFGKPMDKTRYENALKVCALDKDINEFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNECVMTSLRDKTVILVSHQVEFLSEVDKILVKYLHFGVQLDPIWLRCLISPYVKRASYIRTCIKSNLQEHYFVFGSTLTVLILVCSACS* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2702 860 SMART AAA_5 634 817 IPR003593 -
Dod06g2702 860 Gene3D - 581 806 IPR027417 -
Dod06g2702 860 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 65 802 - -
Dod06g2702 860 SUPERFAMILY ABC transporter transmembrane region 276 585 IPR036640 GO:0005524|GO:0016021
Dod06g2702 860 CDD ABCC_MRP_domain1 607 802 - -
Dod06g2702 860 CDD ABC_6TM_ABCC_D1 289 579 IPR044746 GO:0140359
Dod06g2702 860 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 830 IPR003439 GO:0005524
Dod06g2702 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 802 IPR027417 -
Dod06g2702 860 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 65 802 - -
Dod06g2702 860 Pfam ABC transporter transmembrane region 289 555 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod06g2702 860 Pfam ABC transporter 627 759 IPR003439 GO:0005524
Dod06g2702 860 ProSitePatterns ABC transporters family signature. 732 746 IPR017871 GO:0005524
Dod06g2702 860 Gene3D ABC transporter type 1, transmembrane domain 276 580 IPR036640 GO:0005524|GO:0016021
Dod06g2702 860 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 289 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2702 Dod-Chr6 57922225 57926084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2702 583 802 Calmodulin-binding Proteins AT2G36910 26.068 2.57e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2702 - - lja:Lj3g3v2693530.1 1229.93