Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2668 ATGCCTATGGCTGATTCGAAGATGTTCAATGCAGCATTTGGTAGGGTTGGTAGAGCTCTGCTGCCAATATGCGCAAAAGAGCCCAAGCAAATTCATGAGATTAAGGACTTCCTCGTCACAGCCCGGAAGAAAGGTGCATGCTCTGTTAAAATCAAGCGTAGTAGAGATGTGGTCAAGTTCAAGGTTTGTTGCTCCAAGTACCTCTACACCCTTTGTGTCTTTGACCCTGAGAAGGTTGATAATTTGAAGCAGTCACTTCCTCCAGGCTAG 270 0.4593 MPMADSKMFNAAFGRVGRALLPICAKEPKQIHEIKDFLVTARKKGACSVKIKRSRDVVKFKVCCSKYLYTLCVFDPEKVDNLKQSLPPG* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2668 89 PANTHER 60S RIBOSOMAL PROTEIN L38 28 89 IPR002675 GO:0003735|GO:0005840|GO:0006412
Dod06g2668 89 Pfam Ribosomal L38e protein family 28 89 IPR002675 GO:0003735|GO:0005840|GO:0006412
Dod06g2668 89 Gene3D - 28 89 IPR038464 -
Dod06g2668 89 PANTHER 60S RIBOSOMAL PROTEIN L38 28 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2668 Dod-Chr6 56844481 56846331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2668 28 89 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 82.258 7.51e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2668 K02923 - gmx:100305707 113.62