Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2644 ATGAGGAAAGCTACAAGGTGGTTGAAGGGTTTGTTAGGGATGAAGAAGGAGAATAAGGACCACAGTGACAATTCAGGGTCATTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCTAAGCAAGGGAAGGACATTATTGCTCCTCCCAATGGTTCTGCTTCTGATAATAGTGCTTGGGTCAGATCCTACATTGCTGATACTGAGGGTGAGCAGAACAAGCATGCAATTGCTGTGGCAGCTGCCACCGCCGCCGCAGCAGATGCCGCCGTGGCTGCAGCTCAGGCTGCGGTAGCAGTTGTGAGGCTGACAAGCCAAGGGAGGGGCACATTGTTCAGTGCCAGCAGAGAGAAGTGGGCTGCAGTTAAGATCCAAACTTTCTTCAGAGGCTATTTGGCAAGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATCTGGTTAGGAAGAGGGCTGCTGCAACTCTTCATAGTATGCAAGCTCTAATAAGAGCTCAGGCCGCCATCCGATCGCAGCGAGCTCGCCGTTCCATGGGCAAAGACAGTAGATTGCTGCCAGAAGTTCTTGCAAGAAAATCTCTGGAACGATTTGATGAAACAAGGAGTGAGTTCCACAGTAAAAGGCTGCCTACATCTTATGAGACATCACCGAATGGATTTGATGAGAGTCCAAAAATTGTTGAAATTGACACTTACAAGACTAGATCAAGATCTAGGCGCTTTACCTCTACAATGTCTGAATGTGGAGAGGACTTATCCTTCCATGCAGTGTCATCCCCTCTTCCTTTTCCGGTCCCCGGCCGAATCTCGGTCCCCGATTGCCGCCACCTTCAGGATTTCGAATGGTACTTCAATGTTGATGAGTGTAGGTGCTCAACTGCACAAAACACACCAAGGTTCACAACCTATGTGCGCCCTAATAATGCCCCAGCTACACCAGCCAAGAGTGTTTGTGGAGACACATTCTTTAGGCCTTACTACAATTTCCCAAATTACATGTCCAATACTCAGTCATTTAAGGCTAAGCTAAGGTCTTACAGTGCTCCAAAGCAAAGACCTGAGCCAAAGAAAAGGCTTTCACTCAATGAAATGATGGCAGCTAGAAACAGCATAAGTGGTGTTAGAATGCAAAGGCCATCCAATTTCCAGGGTCAAGAATCTTGTAATTTTTGA 1197 0.4703 MRKATRWLKGLLGMKKENKDHSDNSGSLAPDKKEKKRWSFAKQGKDIIAPPNGSASDNSAWVRSYIADTEGEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSASREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQAAIRSQRARRSMGKDSRLLPEVLARKSLERFDETRSEFHSKRLPTSYETSPNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDLSFHAVSSPLPFPVPGRISVPDCRHLQDFEWYFNVDECRCSTAQNTPRFTTYVRPNNAPATPAKSVCGDTFFRPYYNFPNYMSNTQSFKAKLRSYSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSNFQGQESCNF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2644 398 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Dod06g2644 398 Pfam Protein of unknown function (DUF4005) 302 384 IPR025064 -
Dod06g2644 398 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
Dod06g2644 398 MobiDBLite consensus disorder prediction 10 38 - -
Dod06g2644 398 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 390 - -
Dod06g2644 398 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Dod06g2644 398 Pfam IQ calmodulin-binding motif 145 159 IPR000048 GO:0005515
Dod06g2644 398 Pfam IQ calmodulin-binding motif 120 139 IPR000048 GO:0005515
Dod06g2644 398 Gene3D - 60 143 - -
Dod06g2644 398 SMART iq_5 140 161 IPR000048 GO:0005515
Dod06g2644 398 SMART iq_5 117 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2644 Dod-Chr6 56408109 56412148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2644 1 384 IQD Protein Family AT3G16490 54.798 1.20e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2644 - - gmx:100797686 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2644 06 56408109 56412148 Dod06g2644 06 56408109 56412148 ECH
Dod10g1949 10 41296848 41298900 Dod06g2644 06 56408109 56412148 PCT