Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2638 ATGGTTCTTGTACGGATGCCCCTTTTGAAGTTGCTTCACTTCCTTCTCTTTCTGCTTCACATTCACTGCATCAGCTCTTACATGACCACACCAATGAACTGTACGGACACAAGCCGTGTCTGCACCTCTTTCTTGGCATTTAAGCCTCAACAAAACCAGACCTTAGCTGTGATACAAAGCATGTTTGATGTTTTGCCTGGTGACATCACTCTTGAGGACAGTGGATGGGACTATGTGTTCATCAGGAAGAACTGTTCCTGTGCTTCTGGTATCAAGAAGTATGTGTCAAACACCACTTTCACTGTGAGAACCAGCGAAGGGTTTGTGTATGATTTGGTGATGGATGCATATGATGGCCTGGCCTTGCCCCCCAACACCACGAGGATGGCAAGGAATGGTGCTGTTGTGTCACTGAGGTTGTTCTGTGGCTGCTCTAGTGGGTTGTGGAACTATCTGATGAGTTATGTTATGAGAGATGGCGATAGTGTTGAATCATTGGCAAGCAGATTTGGGGTTAGTATGGATAGCATTGAGACTGTGAATGGCATTGATAATCCTGATAATGTCACTCTGGGATCACTTTATTATATACCTCTTGATTCTGTTCCTGGTGATCCTTATCCCATTAACAATGCTACTCCTCCTGCTCCTGTTCCTGCCCCATCTGTTGGGAATGTCTCAGGTGATCAAGTCAATCATAAGGCTCATGTACCCTATGGATGGATCATTGGGGGTTCAGGGGCTGGTCTTGCTCTGATACTATTTGGCATAGTTCTCTGTGTTTTTCTGAGATCATCGAGTAGTTTTTCTGAAGCCAGAAGTCATGAAAAAGATGCTGAGGGAGAGATATCTCATAAATTCCATATTCTTCGGAATCCAACCTTTTTTTGTGGTTCTGGGAGGTACATATGTGGCAAATCTGTAGAACAGAAGCAAACTGATGGTGAATCCAGTAATCATGCAATTGCCATTCCCAAAGTTTCAACTCTAGGGCCTGATGTATTTGACATGGATAAGCCTGTAGTTTTTACATATGAAGAGATTTTTTCCTCAACTGGTGGTTTCTCTGATTCAACTCTACTTGGGCATGGAACATATGGTTCTGTTTACTATTGCCTCCTTCGGGACCAGGAAGTTGCTATTAAAAGAATGACAGCTACAAAAACAAAAGAGTTTATGTCAGAGATGAAAGTTCTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATCGGCTATGCAGCTAGTCATGATGAACTTTTCCTTGTTTATGAATATGCTCAAAAGGGTTCACTCAGAAGCCATTTGCATGATCCTCAAAATAAGGGTAATTCCCCACTTTCTTGGATCATGAGGGTCCAGATTGCTCTTGATGCTGCTAGGGGCCTTGAATACATACATGAGCACACTAAAACTCATTATGTCCACCGAGATATCAAGACAAGCAACATATTACTTGATGCTTCCTTCAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTGGAAAAACAAATGATGGAGAAGTTTCAACTACCAAAGTTGTTGGTACATATGGATATCTTGCTCCAGAATACTTGAGTGATGGCCATGCAACGACCAAAAGTGATGTCTATGCATTTGGTGTTGTCCTTTTTGAGATTATATCAGGGAAGGAGGCCATTGTTCGAACAGATGGCACGATGACAAAAAATCCAGAAAGGCGCTCCCTGGCGTCCGTAATGTTGGCAGTTCTAAGGAACTCACCTGATTCCATGAGCATGTCAAGCATGAGAGATTATATTGATCCTAATATGATGGATCTGTATCCCCATGATTGTGTATTTAAGATGGCCACGCTAGCGAAGCAATGTGTGGACGACGATCCTATCTTACGACCTGACATGAAACAAGTTGTGATTTCCCTCTCACAGATTCTCCTTTCTTCTGTTGAGTGGGAAGCAACTCTAGCTGGGAATAGCCAAGTATTCAGTGGACTTGTTCAGGGAAGATAG 1998 0.4264 MVLVRMPLLKLLHFLLFLLHIHCISSYMTTPMNCTDTSRVCTSFLAFKPQQNQTLAVIQSMFDVLPGDITLEDSGWDYVFIRKNCSCASGIKKYVSNTTFTVRTSEGFVYDLVMDAYDGLALPPNTTRMARNGAVVSLRLFCGCSSGLWNYLMSYVMRDGDSVESLASRFGVSMDSIETVNGIDNPDNVTLGSLYYIPLDSVPGDPYPINNATPPAPVPAPSVGNVSGDQVNHKAHVPYGWIIGGSGAGLALILFGIVLCVFLRSSSSFSEARSHEKDAEGEISHKFHILRNPTFFCGSGRYICGKSVEQKQTDGESSNHAIAIPKVSTLGPDVFDMDKPVVFTYEEIFSSTGGFSDSTLLGHGTYGSVYYCLLRDQEVAIKRMTATKTKEFMSEMKVLCKVHHANLVELIGYAASHDELFLVYEYAQKGSLRSHLHDPQNKGNSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKTNDGEVSTTKVVGTYGYLAPEYLSDGHATTKSDVYAFGVVLFEIISGKEAIVRTDGTMTKNPERRSLASVMLAVLRNSPDSMSMSSMRDYIDPNMMDLYPHDCVFKMATLAKQCVDDDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2638 665 SUPERFAMILY Protein kinase-like (PK-like) 333 637 IPR011009 -
Dod06g2638 665 Gene3D Phosphorylase Kinase; domain 1 331 426 - -
Dod06g2638 665 CDD STKc_IRAK 361 640 - -
Dod06g2638 665 PANTHER BNAA06G02020D PROTEIN 32 665 - -
Dod06g2638 665 SMART serkin_6 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2638 665 Pfam Protein tyrosine and serine/threonine kinase 360 635 IPR001245 GO:0004672|GO:0006468
Dod06g2638 665 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Dod06g2638 665 Gene3D Transferase(Phosphotransferase) domain 1 428 652 - -
Dod06g2638 665 SUPERFAMILY LysM domain 153 198 IPR036779 -
Dod06g2638 665 ProSiteProfiles Protein kinase domain profile. 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2638 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Dod06g2638 665 ProSiteProfiles LysM domain profile. 153 197 IPR018392 -
Dod06g2638 665 SMART LysM_2 154 198 IPR018392 -
Dod06g2638 665 Pfam LysM domain 155 190 IPR018392 -
Dod06g2638 665 CDD LysM 154 197 IPR018392 -
Dod06g2638 665 Gene3D LysM domain 150 203 IPR036779 -
Dod06g2638 665 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 32 665 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2638 Dod-Chr6 56182904 56191444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2638 31 665 Receptor kinase-like Gene Family AT1G51940 71.384 0.0 888
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod06g2638 PK_Tyr_Ser-Thr 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2638 - - gmx:100796989 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2638 06 56182904 56191444 Dod06g2638 06 56182904 56191444 ECH
Dod10g1953 10 41355226 41358948 Dod06g2638 06 56182904 56191444 PCT