Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2624 ATGCCGGTACTGCGTAGCGGAGTGCGCAGGGGCCGGGCAGCAGCAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGGAACAGTTACAACCGTCACAACCGCCACAACCGCAGAGTCCGGTGGTGGAAGGCGAAGCGATTGCAACGAGAACCAGGAGACGGCGTGCGGCGGCGGCAGCAGCGGCAGCGGCGGTGGTTGTGCCAAAGAACAACAACAACAATAATAATAATAATAATAACAAGAAGCAGGAGCAGAAGAAGCAGGGGGTGGTCAATGAGAAGGTAGTTGTAGCTGAGAAGGAGGAAGAGAAGAGGGGAATTGAGGCAGGTGCTGGTGGTGGTGGTGGTGGTGGAGGGGAGAAGAAGGAAGAGGTAGGGGAAAAGCAGATGGATGATTTTGATAGTGGTGGTCGCAGCAATGATAAGGCCAATGCAGGTGAAGATGAGGGCAGCACTGCTCCCCTTCCTGAGAAGGTTCAAGTAGGCGGTTCCCCTTGGTATAAATTAGAAAGGAAACTTGGCAAGGGTGGATTTGGTCAAGTATATGTTGGTCGACGTGTTTCTGGTGGAAACTTGAATGAGAGAACTGGACCTGGAGCTGTAGAGGTTGCATTAAAGTTTGAGCATAGAAGTAGTAAAGGATGTAACTATGGACCACCCTATGAGTGGCAAGTGTACAACACTCTTGGTGGCAGTCATGGTGTGCCACAAGTGCATTACAAGGGCAGGCAAGGCGACTATTATGTCATGGTTATGGATATGCTGGGACCTAGCTTGTGGGATGTTTGGAATAATAACTCTCACACCATGTCCACTGAAATGGTCGCGTGTATTGCCATTGAGGCAATATCCATCTTGGAGAAGATGCATTCTCGAGGGTATGTGCATGGGGATGTGAAGCCAGAAAATTTTCTGCTTGGTCCTCCTGGGACACCTGATGAGAAGAGATTGTTTCTTGTAGATCTTGGATTAGCTACTAAATGGCGGGATAGCACGACAGGTTTGCATGTGGATTATGACCAAAGACCAGATGTTTTCAGGGGCACAGTCCGTTATGCTAGTGTACATGCACATTTAGGGAGAACTGGAAGCAGGAGGGATGACTTGGAATCTCTTGCTTATACGCTGATTTTTCTTCTTCGAGGCCGTCTTCCTTGGCAGGGTTACCAGGGAGAAAACAAAGGATTTCTTGTTTGCAAGAAGAAGATGGGAACGCCTCCAGACAGCTTATGTTCCTTTTGTCCTCAGCCTTTTAGACAGTTTGTAGAACATGTGGTGAACTTGAAGTTTGATGAAGAACCTAACTATGCAAAATACATTTCCTTATTTGATGGGATTGTTGGTCCAAATCCAGATATTAGGCCAATTAATACAGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGGCCGGCTGGCAATGGAAGAAGACGATGATGAACAACCAAAGAAGAAGTTTCGTATGGGTTTGCCAGCAACTCAGTGGATTAGTGTTTACAACGCTCGCAGACCTATGAAACAAAGATATCACTACAATGTGGCTGATCAAAGGCTATCCCAGCACATTGAGAAAGGCAATGAGGATGGCTTATTTATCAGCAGCGTTGCTTCATGTCAGAACCTATGGGCTTTAATCATGGATGCGGGGACAGGTTTCACTGGACAAGTTTATGAACTCTCCTACTGCTTTCTCCATAAGGATTGGATCATGGAGCAGTGGGAAAAAAATTACTACATTAGCGCAATTGCTGGAGCTACTAATGGGAGCTCGCTAGTAGTGATGTCCAAGGGCACACAGTATTTGCAGCAATCATACAAAGTTAGTGATTCGTTTCCTTTCAAGTGGATTAACAAAAAATGGAGGGAGGGCTTTTACGTAACTTCAATGGCCACCTCAGGGCATAGATGGGGAATAGTTATGTCTCGTGGTGCAGGATTTTCTGACCAGGTGGTGGAGCTTGATTTCCTGTATCCTAGTGAAGGGATTCACAAGCGGTGGGACAATGGATACCGGATCACTGCGACTGCTGCAACATGGGACCAAGCAGCTTTTGTCCTGAGTGTGCCTAGGAAGAAGCCCATGGATGAGACTCAGGAAACACTTAGGACTTCTGCTTTCCCTAGTACACATGTCAAGGAGAAATGGGCAAAGAACCTTTACATTGCATCTATTTGCTATGGGCGTACAGTTTCTTGA 2202 0.4705 MPVLRSGVRRGRAAAKQQQQQQQQQQQQEQLQPSQPPQPQSPVVEGEAIATRTRRRRAAAAAAAAAVVVPKNNNNNNNNNNNKKQEQKKQGVVNEKVVVAEKEEEKRGIEAGAGGGGGGGGEKKEEVGEKQMDDFDSGGRSNDKANAGEDEGSTAPLPEKVQVGGSPWYKLERKLGKGGFGQVYVGRRVSGGNLNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKRLFLVDLGLATKWRDSTTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTPPDSLCSFCPQPFRQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEDDDEQPKKKFRMGLPATQWISVYNARRPMKQRYHYNVADQRLSQHIEKGNEDGLFISSVASCQNLWALIMDAGTGFTGQVYELSYCFLHKDWIMEQWEKNYYISAIAGATNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTSMATSGHRWGIVMSRGAGFSDQVVELDFLYPSEGIHKRWDNGYRITATAATWDQAAFVLSVPRKKPMDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2624 733 MobiDBLite consensus disorder prediction 122 147 - -
Dod06g2624 733 CDD STKc_CK1 169 445 - -
Dod06g2624 733 MobiDBLite consensus disorder prediction 69 87 - -
Dod06g2624 733 ProSitePatterns Protein kinases ATP-binding region signature. 175 208 IPR017441 GO:0005524
Dod06g2624 733 MobiDBLite consensus disorder prediction 88 110 - -
Dod06g2624 733 ProSiteProfiles Protein kinase domain profile. 169 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2624 733 SUPERFAMILY Protein kinase-like (PK-like) 169 449 IPR011009 -
Dod06g2624 733 Pfam Protein kinase domain 169 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2624 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Dod06g2624 733 Coils Coil 12 32 - -
Dod06g2624 733 SMART serkin_6 169 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2624 733 PANTHER CASEIN KINASE-RELATED 129 707 - -
Dod06g2624 733 Gene3D Transferase(Phosphotransferase) domain 1 136 488 - -
Dod06g2624 733 PANTHER - 129 707 - -
Dod06g2624 733 MobiDBLite consensus disorder prediction 13 34 - -
Dod06g2624 733 MobiDBLite consensus disorder prediction 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2624 Dod-Chr6 55946192 55952410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2624 130 408 AGC Kinase Gene Family AT3G08730 24.199 1.33e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Dod06g2624 Pkinase 6.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2624 - - vvi:100253221 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2624 06 55946192 55952410 Dod06g2624 06 55946192 55952410 ECH