Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2610 ATGATGGCTGGGAACCCTAACTGGTGGAGCATGATCAATCCATCATCTTTGGTCCCTCCACAGTATGTGCTTGGATCTTCTTCAATTCCTTTTAATTCCTTGACAGAAATTCCAGAACCTTCTCAGTCATGGAGCCAGCTTCTTTTCACTGGAATACCAGGAGAAGAAGAGAGACTTGGATTCAGTCACTTTCAATCAAAAAAGTTAGAGAACTGGGGTGACCATGTCCTCAATCCATCATCAAGAGTTCCAAATATTGTTGATGCAATAAAGCAAGAGGTTTCCCAAAGCGGCAACCTGTACGGCCATGGCCATGAGGAATTTCAGGCTTCTGGGTCACCTTGGTCACATAATAATATGGTTCCAGTTTCTTCCCCTAGGTCAAATGTCACAAGTCTCAGTAGCAATAATTTGTTGGATTTTACTTATAACAACGAGGCAGATCATAGGAAGAACCAATTACCATATGGCACATCTGAGTGTAATAGGACAGCCACTGCTGGAGTTTGTAATAAGAAGGCTAGGGGCCAGCCATCTTCAAGCCAACCACCATTGAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATAACAGCCCTTCACCAGTTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATCAGATTCCTTCAGAGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGCAATGGGTCAAAGAACATGAGGAATCAACACTATGTACATGGAGAAAGAAATTCTGTATTTCCTGAGGACCCGGGTCAGCTGTTGAATGACACTTGCCTGAAAAGAAAGGCAGCTCCAAGCCAGGATGCAAAAGATAAGCCAAAGGACTTGAGGAGTAGAGGTTTGTGTTTGGTTCCTGTGTCTTGCACCCAACATGTAGGAAGTGAAAATGGAGCTGATTACTGGGCACCAGCATATGGTAGTGGATTTTAG 966 0.4369 MMAGNPNWWSMINPSSLVPPQYVLGSSSIPFNSLTEIPEPSQSWSQLLFTGIPGEEERLGFSHFQSKKLENWGDHVLNPSSRVPNIVDAIKQEVSQSGNLYGHGHEEFQASGSPWSHNNMVPVSSPRSNVTSLSSNNLLDFTYNNEADHRKNQLPYGTSECNRTATAGVCNKKARGQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLGNGSKNMRNQHYVHGERNSVFPEDPGQLLNDTCLKRKAAPSQDAKDKPKDLRSRGLCLVPVSCTQHVGSENGADYWAPAYGSGF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2610 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 186 237 IPR036638 GO:0046983
Dod06g2610 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 225 IPR011598 GO:0046983
Dod06g2610 321 PANTHER OS05G0228400 PROTEIN 26 308 - -
Dod06g2610 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 308 - -
Dod06g2610 321 Gene3D - 186 247 IPR036638 GO:0046983
Dod06g2610 321 CDD bHLH_AtbHLH_like 186 233 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2610 Dod-Chr6 55752809 55757143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2610 54 265 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 48.069 1.71e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2610 - - gmx:100802121 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2610 06 55752809 55757143 Dod06g2610 06 55752809 55757143 ECH