Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2601 ATGAGTTGCTCATTTAAGATTTTCAGCAAACACCTCACTCTCCTTCGCTACCATAAGTGCTCTGCCTCTTATGGTTTCACCACCATAGCTTCATCTTCTTCTCTCAACCTTCCATCACTTCCTCGTACGTGCCTCACCTTCTGTTCATCTCAGCTTCGTCATCACTCGTCTTCTCCTGCTTCAGTTATGGAGGTTTTCAAAGCTGTTGCCAATAACGAACTTGCAGCTCATGGAAGTGTTGCTATCAGAGCTGATCAAAAGAGTTACAGTTACATGCAACTAATCTCGTCTGCACGGAAGATATCAAATCTCTTGTGTGGCAGTGATGTGAAAACGTCTGCTAAAATCCTCGGAAATCTTGGGGGAGCTCGAGTAGGAATTGTAGCCAAACCCTCTGCTGAATTTGTTGCTGGAATACTTGGGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAACCAGAGCTCCTGCATGTGATTAATAATTCGGATGTGTCAACAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAAGCATAGCCAATAAAACCTCTTCTCAATTTTTTCATATCCCACCTGTTTCCGCTAAGTCTTCAGAGAAAAGCAGAGATGAACATTCACATAATGGGGAAAGTGATGCAGACAGAATTTTTCAGGAGAACATTGGAAGTTCAAGTGAAGATCCAGCACTAATTTTGTACACCAGTGGGACGACAGGTAAACCTAAGGGAGTGGTTCATACGCACAGAAGCATTGCTGCCCAGGTCCAAACCTTGACAAATGCATGGGAGTACACATCTGCTGATCAGTTTCTGCACTGTCTACCATTACATCATGTTCATGGGCTTTTCAATGGTTTATTTGCCCCTCTCTATGCAGGATCCACGGTTGAATTTATGCCAAAATTTAGTGTGAGGGGAATTTGGCAGAGGTGGCGTGAGTCATATCCAACTGAAGGATCTAAGGCTGATGATGCTATAACTGTGTTCACCGGAGTTCCAACTATGTACACCCGGTTGATACAAGGTTATCATGCAATGGATCCTGAGCTAAAAGCCATTTCAGCATCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGCTCCTCTGCACTCCCCCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAGAGGAGAGCGTAAACCAGGCACTGTTGGCAAACCATTTCCTGGTATACAGGTCAAGATTCTTATAGACGAGGAGAGTAAGAGTGGAACACGTGAAGCGGGGGAGCTTTGCGTTAAAAGCCCTTCATCGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTTACTGAAGATGGATTCTTTAAGACAGGAGATGCGGTGACTACAGATGAAGATGGATATTTCATCATTCTAGGACGTACTAATGCTGATATAATTAAGGCTGGTGGCTATAAACTGTCTGCATTAGAAATTGAATCGGTTATAGCAGAGCATCCTGTTGTCTCAGAATGCTGCGTTTTGGGCTTACCAGACAAAGATTATGGAGAAGTTGTTGGTGCAATTATTGTACCAGAGGCTGATGTTAAACAAAAGCAAGATGAAGAGTCAAAGACTGCTCTAAGCCTAGAAGAGTTATCCACTTGGGCCAAAAACAAACTTGCACCTTACAAGATACCAACTAAACTGTACGTGTGGGACTCAATCCCTCGCAATGCAATGGGGAAGGTGAATAAGAAAGAGCTCAAGAAACTTCTGGCTTCAGAACAGTAA 1833 0.4332 MSCSFKIFSKHLTLLRYHKCSASYGFTTIASSSSLNLPSLPRTCLTFCSSQLRHHSSSPASVMEVFKAVANNELAAHGSVAIRADQKSYSYMQLISSARKISNLLCGSDVKTSAKILGNLGGARVGIVAKPSAEFVAGILGTWFSGGVAVPLALSYPEPELLHVINNSDVSTILSTEDHSELMQSIANKTSSQFFHIPPVSAKSSEKSRDEHSHNGESDADRIFQENIGSSSEDPALILYTSGTTGKPKGVVHTHRSIAAQVQTLTNAWEYTSADQFLHCLPLHHVHGLFNGLFAPLYAGSTVEFMPKFSVRGIWQRWRESYPTEGSKADDAITVFTGVPTMYTRLIQGYHAMDPELKAISASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLRGERKPGTVGKPFPGIQVKILIDEESKSGTREAGELCVKSPSSFKEYWKLPEVTKESFTEDGFFKTGDAVTTDEDGYFIILGRTNADIIKAGGYKLSALEIESVIAEHPVVSECCVLGLPDKDYGEVVGAIIVPEADVKQKQDEESKTALSLEELSTWAKNKLAPYKIPTKLYVWDSIPRNAMGKVNKKELKKLLASEQ* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2601 610 SUPERFAMILY Acetyl-CoA synthetase-like 63 608 - -
Dod06g2601 610 Gene3D - 497 610 IPR045851 -
Dod06g2601 610 MobiDBLite consensus disorder prediction 201 223 - -
Dod06g2601 610 Pfam AMP-binding enzyme 78 500 IPR000873 -
Dod06g2601 610 ProSitePatterns Putative AMP-binding domain signature. 238 249 IPR020845 -
Dod06g2601 610 Gene3D - 66 494 IPR042099 -
Dod06g2601 610 MobiDBLite consensus disorder prediction 203 221 - -
Dod06g2601 610 PANTHER MALONATE--COA LIGASE-LIKE 4 608 - -
Dod06g2601 610 PANTHER ACYL-COA SYNTHETASE 4 608 - -
Dod06g2601 610 Pfam AMP-binding enzyme C-terminal domain 511 596 IPR025110 -
Dod06g2601 610 CDD MCS 79 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2601 Dod-Chr6 55664852 55674195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2601 233 608 Monolignol Biosynthesis Gene Families AT4G19010 30.179 2.86e-45 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2601 K18660 - gmx:100813324 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2601 06 55664852 55674195 Dod06g2601 06 55664852 55674195 ECH