Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2587 ATGTCGTCTCCGGCGACGGAGACTTCCCCTGTGACAAATTCCTCCGCCGTCTCCCCTCCTTCTCCGGCTACCGTCGCCGCCTCTCCGCCGTCTCCGACCGCCACAGCCACCAACGCAACCGCATCTCCGCCGTCTCCTCCGGCCGTCACCACCGGAGCTCCGACGAACACGACGCCGGCCGTGACGACGACGGCGGTGGAGCAGGATTCCGGCGGGTTAGCGAGGGGGACGTTGAACGGAATAATCATAGGGGCAGTGTTGGGTTCGGTGGGTATGCTTATCATTGGGGTCATTTTCGTCTTTTTGTACAGGAGGGCGAGGAGGAGAGGAGGAGGCTGTGGTTTTGAGCACAACAACTACTACGGTGCTCCGCCGCAGCAGAAAGCTGACCGGGTTGGTGGCTTACCTCAGCAATGGCAAGCCACCCATCCTCCTTTTACTGATGGTAAAGAAGGGTTGCCTCCGAAGCCTCCTAGGGTTTTGGTGAATCAGCAGCAGCCATCATCTGCTGGTCTTCCCACGCCACCTGTGGATTCTTCGGCCACCAGCTCTAGTTTGGGGTCCGAGAGGCCGTACATTTCCCCCACTCCTGGCCTTTCCTTGTCTCTATCTCAGAGCACTTTTGCATATGATGAGTTAGTGAGGGCGACGGATGGATTCTCCAGCTCGAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTCCACAAAGGAGTTCTCCCAAATGGAAAAACTGTTGCTGTTAAGCAGTTGAAATCTGAGAGTAGGCAGGGGGAGCGTGAGTTTCATGCAGAAGTCGAGGTCATTAGCCGTGTCCATCACAGACATCTTGTTTCCTTAGTTGGATACTGCATCTCAGGTGGCCAGAGGATGCTTGTTTATGAGTTTGTGCCAAATAAAACGCTAGAATTTCATTTGCATGGAAAGGACAGACCAACTATGGACTGGTCAACGAGGATGAAGATTGCTATTGGATCTGCAAAAGGATTAGCATATCTCCACGAGGATTGTCAGCCCAAAATCATACATCGGGACATTAAGGCATCTAACATCCTTATTGATGATAATTTTGAGGCAAAGGTTGCAGATTTTGGGCTTGCCAAATTTTCATCAGATACAGATACCCATGTCTCTACTCGAGTGATGGGAACCTTTGGATACATGGCTCCCGAATATGCTGCTAGTGGGAAACTCACAGAAAAATCAGATGTTTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATAACTGGACGAAAACCTGTTGATAAAACTGAGTCTTTCACTGATGACAGCATGGTTGAATGGGCAAGGCCTTTACTCTCCCAAGCTTTGGAAAATGGAAACTTTAACGGACTTGCAGATCTAAGGTTGCACACAAATTATGATCCTGATGAGATGACTCGATTGACTGCTTGTGCTGCAACTTGCGTGCGCCATTCAGGCAGGCGTCGCCCTCGAATGAGCCAGGTAGTTCGAGCTCTAGAAGGAAATATTTCTCTAGAAGATCTATATGAGGGGGGCACACCAGGGCACAGCAGGGTTTTCGGTTCCTTCGAGAGTTCAAATTATGATGCTAGCCAATACAATGAAGACCTAAAGAAGTTCAGGAAGCTGGCCCTCGAAAGCCAACAGCAAGGTACCAATGAGTACAGCGGACCAAGCAGCGAGTATGGTCAACATCCATCTGCATCAACCAGTTCAGGCCTGCAAAATACATGA 1716 0.5023 MSSPATETSPVTNSSAVSPPSPATVAASPPSPTATATNATASPPSPPAVTTGAPTNTTPAVTTTAVEQDSGGLARGTLNGIIIGAVLGSVGMLIIGVIFVFLYRRARRRGGGCGFEHNNYYGAPPQQKADRVGGLPQQWQATHPPFTDGKEGLPPKPPRVLVNQQQPSSAGLPTPPVDSSATSSSLGSERPYISPTPGLSLSLSQSTFAYDELVRATDGFSSSNLLGQGGFGYVHKGVLPNGKTVAVKQLKSESRQGEREFHAEVEVISRVHHRHLVSLVGYCISGGQRMLVYEFVPNKTLEFHLHGKDRPTMDWSTRMKIAIGSAKGLAYLHEDCQPKIIHRDIKASNILIDDNFEAKVADFGLAKFSSDTDTHVSTRVMGTFGYMAPEYAASGKLTEKSDVFSFGVVLLELITGRKPVDKTESFTDDSMVEWARPLLSQALENGNFNGLADLRLHTNYDPDEMTRLTACAATCVRHSGRRRPRMSQVVRALEGNISLEDLYEGGTPGHSRVFGSFESSNYDASQYNEDLKKFRKLALESQQQGTNEYSGPSSEYGQHPSASTSSGLQNT* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2587 571 SUPERFAMILY Protein kinase-like (PK-like) 194 493 IPR011009 -
Dod06g2587 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Dod06g2587 571 Gene3D Transferase(Phosphotransferase) domain 1 296 502 - -
Dod06g2587 571 ProSitePatterns Protein kinases ATP-binding region signature. 226 248 IPR017441 GO:0005524
Dod06g2587 571 MobiDBLite consensus disorder prediction 538 571 - -
Dod06g2587 571 MobiDBLite consensus disorder prediction 539 571 - -
Dod06g2587 571 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 566 - -
Dod06g2587 571 SMART serkin_6 220 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2587 571 MobiDBLite consensus disorder prediction 162 191 - -
Dod06g2587 571 Pfam Protein tyrosine and serine/threonine kinase 223 492 IPR001245 GO:0004672|GO:0006468
Dod06g2587 571 ProSiteProfiles Protein kinase domain profile. 220 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2587 571 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 566 - -
Dod06g2587 571 CDD STKc_IRAK 226 495 - -
Dod06g2587 571 Gene3D Phosphorylase Kinase; domain 1 194 295 - -
Dod06g2587 571 MobiDBLite consensus disorder prediction 124 191 - -
Dod06g2587 571 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2587 Dod-Chr6 55151577 55157128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2587 205 539 Trihelix Transcription Factor Family AT1G70460 64.179 1.94e-154 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dod06g2587 PK_Tyr_Ser-Thr 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2587 - - aip:107617256 853.588