Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2577 ATGGATTTCTGGCCAGAATTTCTTGCAAGCAGTTGGGGTAAGGAGTTTGTAGCAGGAGGGTTTGGAGGCATTGCTGGCATAGTATCTGGTTATCCATTGGACACACTACGCATAAGGCAACAAAGCTCAACCTACAATGGCTCACCATTCACCATCCTTAGACACATGGTGGCTAGGGAAGGACCAGCTTCTTTGTACCGTGGCATGGGAGCACCTTTGGCCTCAGTTACTTTCCAGAATGCGATAGTTTTCCAAACTTATGCAGTTCTCTCAAGGGCATTTGACAAATCAGTTTCTGCCAAAGACCCTCCTTCCTACAAGGGTGTCGCTTTAGGAGGAGTTGGTACAGGTGCTCTCCAAAGCATATTGCTTTCGCCAGTAGAGTTGGTTAAAATTCGTCTTCAACTGCAGAACACAAACAGCTTGACAGCACCCCAAAAGGGTCCTGTTAGGGTTGCTAAAAACATATGGAAACAAGAGGGACTTAGAGGCATATATAGAGGATTTGGCATCACTCTGATCAGGGATGCACCTTCCCATGGTTTCTACTTCTGGACATATGAATACATGAGAGAACAGCTTCACCCAGGTTGCAGAAAAAGTGGTCAAGAAAGCTTGGCTACTATGCTAATAGCGGGAGGGTTAGCCGGGGTAGCAAGTTGGGTTTGTTGCTACCCTTTTGATGTCATGAAGACAAGACTACAAGCTCAAACACCAGCTTCACTGAAATACAAGGGCATCCTTGACTGCCTCAGAAAGAGCATTAAACAAGAAGGGTATGGTGTGCTATGGCGTGGACTAGGAACCGCAGTTGCTAGAGCGTTTGTGGTGAATGGTGCAGTGTTTTCTGCCTATGAGATTACACTGAGGTTATTATTTAGCAATGGAAGTATTCAAATGCAGGAAACTATTTAG 915 0.4546 MDFWPEFLASSWGKEFVAGGFGGIAGIVSGYPLDTLRIRQQSSTYNGSPFTILRHMVAREGPASLYRGMGAPLASVTFQNAIVFQTYAVLSRAFDKSVSAKDPPSYKGVALGGVGTGALQSILLSPVELVKIRLQLQNTNSLTAPQKGPVRVAKNIWKQEGLRGIYRGFGITLIRDAPSHGFYFWTYEYMREQLHPGCRKSGQESLATMLIAGGLAGVASWVCCYPFDVMKTRLQAQTPASLKYKGILDCLRKSIKQEGYGVLWRGLGTAVARAFVVNGAVFSAYEITLRLLFSNGSIQMQETI* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2577 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 193 IPR018108 -
Dod06g2577 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 93 IPR018108 -
Dod06g2577 304 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 294 - -
Dod06g2577 304 Gene3D Mitochondrial carrier domain 13 299 IPR023395 -
Dod06g2577 304 SUPERFAMILY Mitochondrial carrier 11 286 IPR023395 -
Dod06g2577 304 Pfam Mitochondrial carrier protein 11 96 IPR018108 -
Dod06g2577 304 Pfam Mitochondrial carrier protein 111 194 IPR018108 -
Dod06g2577 304 Pfam Mitochondrial carrier protein 204 295 IPR018108 -
Dod06g2577 304 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 294 - -
Dod06g2577 304 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Dod06g2577 304 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Dod06g2577 304 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Dod06g2577 304 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Dod06g2577 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2577 Dod-Chr6 54946392 54949790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2577 1 295 Antiporters AT1G79900 71.525 4.66e-149 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2577 K15109 - gmx:100812056 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2577 06 54946392 54949790 Dod06g2577 06 54946392 54949790 ECH