Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2562 ATGCCTAAGAAGAAGATTCAAAAATCCCTTCAAGACTACATCTCCAAGATCAAAAGTACTCCTCACCCACAAATCCAATTACCCTCTAAGAAATGGATTCTCTCAGGCTGCAAGCACCCCAAGACCCCTTCTTTTTCCCTAGATGAAAAGAAAAACGAGTCTCAACACAGCACCGACAACAACAACAGCAAGAAGGATGATGAAGCCACACTAGCAGATATTGATCGTTTCCTCTTTGAGAATTTCAATTCCCTTTACCTCAAAGATGATGAAGAACCCAGTACCACCAACAAGAAAGACCATAACACCAAAAGGGTCTCTAAAGAAGAAACAGATGATAACAAAACCCCAAAACTACAACCAATCTTTCTGGATGACACACCAATTGATCTACGTGGCTCTAGTCGATTCTTCATGACATGTGGCTTTTTGGGTGACGATGAAGCTGGATCAAGCTCTGCCTCAATAACACTCAATGGTTCATCTTCATTTTCACACTTATTCCATCGTGAAAAGGGTCATGGTCACGACCAGAATCGTGATCATGGTCAAAAGCTTTCGGAGAATTGTGTGGTCGTGTTAGCGTGCTCGGAGAGCCCCTATGAGGATTTCAAGCGCTCCATGCAAGGCATGGTGGAGGCAAGGCAAAGGAACAACGAAAAGGTGGATTGGGATTTCATGGAGGAGCTTTTGTTTTGTCACATAAACCTGAATGAGAAGAAGTCACACAAGTTTATACTAAGTGCTTTTGTGGACTTGATCACCACCATGCGTGGCCAGAGGTCGGAGAATTCTCCGATGGCGGCGACGGCGAAGCCGCGGAGTGTTCGAACCGTTAAGATTGGAAGGGAGGTGAGGAAGAAGACCAAAGAGGTCACATTGGAATTTGGATCTTCTTAA 900 0.4444 MPKKKIQKSLQDYISKIKSTPHPQIQLPSKKWILSGCKHPKTPSFSLDEKKNESQHSTDNNNSKKDDEATLADIDRFLFENFNSLYLKDDEEPSTTNKKDHNTKRVSKEETDDNKTPKLQPIFLDDTPIDLRGSSRFFMTCGFLGDDEAGSSSASITLNGSSSFSHLFHREKGHGHDQNRDHGQKLSENCVVVLACSESPYEDFKRSMQGMVEARQRNNEKVDWDFMEELLFCHINLNEKKSHKFILSAFVDLITTMRGQRSENSPMAATAKPRSVRTVKIGREVRKKTKEVTLEFGSS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2562 299 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 191 256 IPR006458 -
Dod06g2562 299 MobiDBLite consensus disorder prediction 43 68 - -
Dod06g2562 299 MobiDBLite consensus disorder prediction 89 116 - -
Dod06g2562 299 Pfam Transcriptional repressor, ovate 197 257 IPR006458 -
Dod06g2562 299 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 273 - -
Dod06g2562 299 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 273 IPR038933 GO:0045892
Dod06g2562 299 ProSiteProfiles OVATE domain profile. 193 256 IPR006458 -
Dod06g2562 299 MobiDBLite consensus disorder prediction 89 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2562 Dod-Chr6 54789515 54790414 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod06g2562 Ovate 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2562 - - ahf:112709854 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2562 06 54789515 54790414 Dod06g2562 06 54789515 54790414 ECH
Dod10g2015 10 41891594 41892750 Dod06g2562 06 54789515 54790414 PCT