Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2561 ATGAGCGTGGTGGGTTTTGATTTTGGCAATGAGAGCTGCATTGTTGCGGTTGCGAGGCAGAGGGGGATTGATGTTGTGCTCAATGATGAGTCTAAGCGTGAAACTCCGGCTATTGTGTGCTTTGGTGACAAGCAACGCTTCATCGGCACTGCTGGGGCTGCATCCACTATGATGAACCCCAAGAATTCTATCTCACAGATTAAGAGACTCATTGGCAGACAATTTTCTGATCCTGAATTGCAGCAAGATCTCAAGTCATTGCCTTTCAATGTCACAGAAGGCCCTGATGGATACCCATTAATTCACGTGCGCTACATGGGTGAAGCTAAGACATTTACACCTACACAAGTGTTTGGAATGATGTTGTCAAATCTTAAGGAAATAGCCCAGAAAAATCTCAATGCGGCTGTTGTTGATTGTTGCATTGGAATCCCAGTTTATTTTACTGATCTTCAGAGGAGGGCTGTGTTGGATGCAGCCACTATTGCTGGTTTGCACCCGCTTCGCCTGTTCCACGAAACAACTGCGACTGCATTGGCTTATGGGATTTATAAGACGGATCTTCCTGAAAATGATCAGCTGAATGTTGCTTTTGTTGACATTGGACATGCTAGCATGCAAGTGTGCATTGCTGGCTTCAAAAAGGGTCAGCTGAAAGTATTGGCTCATTCATTTGATAGGTCTCTAGGTGGTAGGGATTTTGATGAGGAGGTGGAAGACTGGCTATATGAGGAGGGCGAAGATGAAACTAAAGGTGTATATATTGCCAAACTTGAAGAACTCCAAAAGCAAGGTGATCCTGTTGAAGCACGATACAAAGAATTCATGGAGAGGGGTACAGTAATTGATCAGTTCAACTATTGTATAAACAGTTACAGAGAAGCTGCAATGTCAAATGATCCCAAATTTGATCACATTGACCTCAATGACAAGCAGAAGGTCCTAAATGAATGTGCCGAGGCTGAGAACTGGCTTAGGGAGAAGCAGCAGCAGCAAGAATCACTTCCAAAATATGCCAACCCTGTACTCTTATCAGCTGAAATAAGAAGGAAAGCGGAGGCTGTTGATAGGTATTTGGTTTGTAAGCCAATTATGACGAAACCAAGGCCAGCCAAGCCAGCTACTCCACCAGCACCAGCACCAGCAACCCCAGCTCCTCAGGATGGTGAGCAGGAGCAACCTCAGGGAGATGCAAGTGCCAATGCTAATACCATCCCTAATGAGAATGCAGGAGACACTGGTAGTCAGGTCCCACCAACATCTACTGAACCAATGGAGACTGACAAGTCACAGAACACAGAGTCTGCATAA 1311 0.4523 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQQDLKSLPFNVTEGPDGYPLIHVRYMGEAKTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEEVEDWLYEEGEDETKGVYIAKLEELQKQGDPVEARYKEFMERGTVIDQFNYCINSYREAAMSNDPKFDHIDLNDKQKVLNECAEAENWLREKQQQQESLPKYANPVLLSAEIRRKAEAVDRYLVCKPIMTKPRPAKPATPPAPAPATPAPQDGEQEQPQGDASANANTIPNENAGDTGSQVPPTSTEPMETDKSQNTESA* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2561 436 SUPERFAMILY Actin-like ATPase domain 192 254 IPR043129 -
Dod06g2561 436 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Dod06g2561 436 MobiDBLite consensus disorder prediction 366 436 - -
Dod06g2561 436 Gene3D - 38 113 - -
Dod06g2561 436 Coils Coil 311 331 - -
Dod06g2561 436 Gene3D - 186 229 - -
Dod06g2561 436 PANTHER HSC70CB, ISOFORM G-RELATED 1 237 - -
Dod06g2561 436 PANTHER HSC70CB, ISOFORM G-RELATED 237 435 - -
Dod06g2561 436 Pfam Hsp70 protein 3 250 IPR013126 GO:0005524|GO:0140662
Dod06g2561 436 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 237 - -
Dod06g2561 436 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 237 435 - -
Dod06g2561 436 MobiDBLite consensus disorder prediction 388 436 - -
Dod06g2561 436 PRINTS 70kDa heat shock protein signature 2 15 - -
Dod06g2561 436 PRINTS 70kDa heat shock protein signature 140 160 - -
Dod06g2561 436 PRINTS 70kDa heat shock protein signature 30 42 - -
Dod06g2561 436 Gene3D - 5 185 - -
Dod06g2561 436 MobiDBLite consensus disorder prediction 369 384 - -
Dod06g2561 436 Gene3D Actin; Chain A, domain 4 230 251 - -
Dod06g2561 436 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 287 374 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2561 Dod-Chr6 54772024 54776292 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2561 4 251 Calmodulin-binding Proteins AT5G02500 36.290 3.64e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2561 K09489 - gmx:100778196 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2561 06 54772024 54776292 Dod06g2561 06 54772024 54776292 ECH