Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2559 ATGGATGGCACTGAGGATGATGGAAGGTATCCCCCTAACCCATATGGTGTTAATCACCACCAGGGTTCTGGTTATCTGAGTGGCAGGAGGCTTCCGGTTAGGAGTTCTCCGTATTCTCAGCAGGCCGCAAATGAGTATGTGGAAGATAATAATGATGATGAGGATGAAGAAGATGAAGAACAATTAGTAGAGGAGGAGGAAGAAGAAGAAGAAGATGATGATGATGATGTTCAAAGTAATAGTGCACATATTTCCCAAAAGAATGTTGTTCGGAACAATGATGATGAAGGTGATGAAGACAAGGATGGGGATGAAAATGATGGTAACAATGATGACGAGGCCGGCAAGGATGGGGATGAAAATGATGGTAACAATGATGATGATGACGATGACAACAATGACAATGATGATGCTAAGCTAGAAGTTTATAGCACAAAGAGTGAAGATGATCTAAAGTGGCATCCAAAGAAGCGAAAACTGAAGAGTTTGATTTCGGCTTATGAATTTGCTCCCCGAGTACCAGCACCATCAGCCCCTAAACCATTTTCCGGTGGTAGGAATTCTCTTACTGACTGGACCGAGCCCGAGACGTTTGTTCTTCTTGATGCTTGGGGTGACAAGTTTCTTCAACATGGAAGGAAGAGCCTTCGATCTGAGGAATGGCAAGAAGTTGCGGAGAAAGTATCTCAAGTCTCAAAAATTGAAAGGACAGATGCTCAGTGTAGGAATCGTTTAGATACATTGAAGAAGAAATACAAAAAGGAGACGGCCAAGTTAGCAAAAATGGGAGGTGGAGCTTGCAAATGGGTTTATTTTCACAGGATGGATAAGTTAATGTCCTCTCCGCTGCAACAAGCAGGCCTCTCTTGCGGTGTGGACTCAGGAGAGTATGTGTTTATGAATCCTAGAGTTTATTTGAACCGCGCAAGCGGTTTGGATGAAATGAGGGATAGTCCTGGGGACTCAGAATCCACTGGTGAAGATGTTTTAGATGGACTCAAACCGAAGAAAAGAAGGCGCTCAAGGGACGGCGATGAAGCTTCTTCATTCAGATTGCTTGCTAACTCCATTCAGAAATTCAGTGAGATATATGAGAAGATTGAAAATAACAAATGGCAGCAGATGGTGGAACTGGAAAAGATGAGGATGGAACTCCATAAGGACTTGGAAACACAGAAGAGGCAGATTTTAGAGAGAGTGCGGAGTGAAATTTCAAAACTACATCAGAGAGATGATGATTATGAGGGGTGA 1251 0.4309 MDGTEDDGRYPPNPYGVNHHQGSGYLSGRRLPVRSSPYSQQAANEYVEDNNDDEDEEDEEQLVEEEEEEEEDDDDDVQSNSAHISQKNVVRNNDDEGDEDKDGDENDGNNDDEAGKDGDENDGNNDDDDDDNNDNDDAKLEVYSTKSEDDLKWHPKKRKLKSLISAYEFAPRVPAPSAPKPFSGGRNSLTDWTEPETFVLLDAWGDKFLQHGRKSLRSEEWQEVAEKVSQVSKIERTDAQCRNRLDTLKKKYKKETAKLAKMGGGACKWVYFHRMDKLMSSPLQQAGLSCGVDSGEYVFMNPRVYLNRASGLDEMRDSPGDSESTGEDVLDGLKPKKRRRSRDGDEASSFRLLANSIQKFSEIYEKIENNKWQQMVELEKMRMELHKDLETQKRQILERVRSEISKLHQRDDDYEG* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2559 416 MobiDBLite consensus disorder prediction 1 152 - -
Dod06g2559 416 Pfam Myb/SANT-like DNA-binding domain 191 278 IPR044822 -
Dod06g2559 416 PANTHER OS01G0718900 PROTEIN 99 413 - -
Dod06g2559 416 Coils Coil 375 395 - -
Dod06g2559 416 Gene3D - 192 254 - -
Dod06g2559 416 MobiDBLite consensus disorder prediction 97 136 - -
Dod06g2559 416 MobiDBLite consensus disorder prediction 47 77 - -
Dod06g2559 416 MobiDBLite consensus disorder prediction 312 345 - -
Dod06g2559 416 MobiDBLite consensus disorder prediction 314 345 - -
Dod06g2559 416 ProSiteProfiles Myb-like domain profile. 192 249 IPR001005 -
Dod06g2559 416 MobiDBLite consensus disorder prediction 137 152 - -
Dod06g2559 416 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 99 413 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2559 Dod-Chr6 54766877 54768403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2559 339 410 Trihelix Transcription Factor Family AT3G14180 42.466 4.08e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod06g2559 Myb_DNA-bind_4 3.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2559 - - tcc:18595893 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2559 06 54766877 54768403 Dod06g2559 06 54766877 54768403 ECH