Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2558 ATGAGCGTGGTGGGTTTTGATTTTGGCAATGAGAGCTGCATTGTTGCGGTTGCGAGGCAGAGGGGAATTGATGTTGTGCTCAATGATGAGTCCAAGCGTGAAACTCCGGCTATTGTGTGCTTTGGTGACAAGCAACGCTTCATTGGCACTGCTGGGGCTGCATCCACTATGATGAACCCCAAGAATTCTATCTCCGAGATTAAGAGACTCATTGGCAGACAATTCTCTGATCCTGAATTGCAGCAAGATATCAAGTCATTTCCTTTTAATGTCACCGAAGGCCCTGATGGGTACCCGTTAATTCACGTGCGCTACATGGGTGAAGCTAAGACATTTACACCTACACAAGTATTTGGAATGATGTTGTCAAATCTTAAGGAAATAGCCCAGAAAAATCTCAATGCGGCTGTTGTTGATTGTTGCATTGGAATCCCAGTTTATTTTACTGATCTTCAGAGGAGGGCAGTGTTGGATGCAGCCACTATTGCTGGTTTGCACCCTCTTCGCCTGTTCCATGAAACAACTGCAACTGCATTGGCTTATGGGATTTATAAGACGGATCTTCCTGAAAATGATCAGCTGAATATTGCTTTTGTCGACATTGGACATGCTAGCATGCAAGTGTGCATTGCTGGCTTCAAAAAGGGTCAGCTGAAAGTATTGGCTCATTCATATGATAGGTCTCTAGGTGGTAGGGATTTTGATGAGGTGGTGGAAGACTGGCTATATGAGGAGGGCGAAGATGAAACTAAAGGTGTATATATTGCCAAACTTGAAGAACTCCAAAAGCAAGGTGATCCTATTGAAGCTCGTTACAAAGAATTCATGGAGAGGGGTACAGTAATTGATCAGTTCAACTACTGTATAAATAGTTACAGAGAAGCTGCAATGTTGAATGATCCCAAATTTGATCACATTGACCTCAGTGACAAGCAGAAGGTCCTAAATGAATGTCTCGAGGCTGAGAACTGGCTTAGGGAGAAGCAGCAGCAGCAGGAATCACTTCCAAAATATGCCAACCCCGTACTCTTGTCAGCTGACATAAGACGGAAAGCAGAGGCTGTTGATAGGGTTTGTAAGCCAATTATGACGAAACCAAGGCCAGCCAAGCCAGCTACTCCACCAGCACCAGCAACCCCACCTCCTCAGGATGGTGAGCAGGAGCAACCTCAGGGAGATGCAAGTGCCAATGCTAATGCTAACCCTAATGAGAATGCAGGGGACTGTGGTAGTCAGGTCCCACCAGCATCTACTGAACCAATGGAGACTGAAAAGTCGGAGAACGCAGGGTCTGCATAA 1299 0.4557 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISEIKRLIGRQFSDPELQQDIKSFPFNVTEGPDGYPLIHVRYMGEAKTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNIAFVDIGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVVEDWLYEEGEDETKGVYIAKLEELQKQGDPIEARYKEFMERGTVIDQFNYCINSYREAAMLNDPKFDHIDLSDKQKVLNECLEAENWLREKQQQQESLPKYANPVLLSADIRRKAEAVDRVCKPIMTKPRPAKPATPPAPATPPPQDGEQEQPQGDASANANANPNENAGDCGSQVPPASTEPMETEKSENAGSA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2558 432 Gene3D Actin; Chain A, domain 4 230 251 - -
Dod06g2558 432 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 291 372 IPR029048 -
Dod06g2558 432 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Dod06g2558 432 MobiDBLite consensus disorder prediction 359 432 - -
Dod06g2558 432 PANTHER HSC70CB, ISOFORM G-RELATED 1 237 - -
Dod06g2558 432 PANTHER HSC70CB, ISOFORM G-RELATED 238 431 - -
Dod06g2558 432 Pfam Hsp70 protein 3 250 IPR013126 GO:0005524|GO:0140662
Dod06g2558 432 Gene3D - 5 185 - -
Dod06g2558 432 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 238 431 - -
Dod06g2558 432 PRINTS 70kDa heat shock protein signature 140 160 - -
Dod06g2558 432 PRINTS 70kDa heat shock protein signature 2 15 - -
Dod06g2558 432 PRINTS 70kDa heat shock protein signature 30 42 - -
Dod06g2558 432 MobiDBLite consensus disorder prediction 367 384 - -
Dod06g2558 432 Gene3D - 38 113 - -
Dod06g2558 432 Gene3D - 186 229 - -
Dod06g2558 432 Gene3D - 281 366 IPR029048 -
Dod06g2558 432 SUPERFAMILY Actin-like ATPase domain 192 253 IPR043129 -
Dod06g2558 432 MobiDBLite consensus disorder prediction 385 432 - -
Dod06g2558 432 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2558 Dod-Chr6 54748551 54753947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2558 4 251 Calmodulin-binding Proteins AT5G02500 35.887 2.91e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2558 K09489 - gmx:100778196 457.603