Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2554 ATGGGTGTGAACAACAACAACAACAGAGTCGTCGACCACTTCGTGTGCCATGGAAAAACCATAACAATCCAATCCGAGATACCAATAATGCCACCACCACCACCTTTGGAAATCCACAGCGTTCGGTTGCCTCCAAAACGCACCACTTTCCAGAAGCTGAGGCACAGGGTCTCTGAGATCTTCTTCCCTGATGACCCTTTGCACAGGTTCAAGAACACAACGTGGTTCGTGAAGCTCTTGTTTGGTGTTCAGTACTTGTTCCCCATCTTCCAGTGGGGCCCTCAATACAACCTTTCGCTTCTGCGCTCTGATGTCGTCTCTGGTCTCACCATTGCCAGTCTTGCCATTCCTCAGGGAATCAGTTATGCTAAGCTTGCAAACTTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCCCCATTGATATATTCAGTTCTCGGGAGTTCAAGACATCTTGGTGTTGGTCCAGTTTCAATTGCATCCTTAGTCATGGGATCAATGTTAAGTGAGACCCTTTCTTATACTCAAGATCCAATTCTCTACCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTCTTCCAATCTTCTCTAGGTATATTAAGGTTAGGCTTTGTAATTGATTTTTTGTCAAAGGCAACGTTGGTTGGCTTCATGGCTGGTGCAGCTATAATTGTGTCACTACAGCAGCTGAAAGGGTTGCTTGGAATAGTGCACTTCACCAGCAAGATGCAAATAGTACCTGTACTGGTCTCTGTTTTCAAGCAAAGAGACGAGTGGTCATGGCAAACTATTGTACTGGGATTTGGCTTCCTAGCCTTCCTGCTGATAGCAAGGCACATTAGCTTGAGGAAGCCAAAATTATTCTGGGTTTCGGCAGCTGCCCCATTGACATCAGTTATTCTTTCGACCATTTTAGTCTTTCTCCTGAGAAATACGGCTCATAAAATTGCAATTATAGGTGAATTGCCAAAAGGCCTTAATCCACCCTCATCAAACATGTTATTCTTTAATGGCCCTTATTTGGCTCTTGCCATCAAAACCGGAATTGTCACAGGCATATTATCCCTCACTGAAGGAATTGCTGTTGGAAGAACATTTGCTGCACTTAAGAACTACCAGGTGGATGGAAATAAAGAAATGATGGCCATCGGTCTTATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTGACAACAGGATCCTTTTCTCGATCAGCTGTTAACTACAATGCTGGAGCACAAACAGCAGTCTCAAATATAATCATGGCTTCAGCTGTTCTTGTGACCCTTCTGTTTCTCATGCCTTTGTTCTACTACACACCGAATGTTGTCTTAGCAGCCATTATCATCACTGCTGTGATTGGACTAATAGATTATCAAGCTGCATGTAAATTATGGAAGGTTGACAAGCTCGATTTCTTGGCCTGCATGTGCTCCTTTTTTGGAGTTCTGTTCATTTCGGTGCCTTTAGGCCTTGGAATAGCGGTGGCAATATCAATCTTCAAGATCCTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCAGGGACAACAATCTTCCACAATGTTAACCAATATAGAGAAGCTCTAAGAATTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACTTACCTGCAGGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCTTATAAAAGCAAGCAGTGGAAGTAAATTGGAGTGCATAATTTTAGACATCACAGCTGTGACAGCCATAGACACAAGTGGGATAGACACTTTATGTGAACTAAGGAAGATGCTGGATAAAAGATCACTTCAGCTAGTGCTGGCAAATCCAGTTGGAAGTGTGATGGAAAAGTTACATCAATCAAATATTTTGGATTCCTTTGGGTTGAAAGGACTCTATCTCACAGTGGCAGAAGCTGTGGCTGATATTTCATCCTCTTGGAAAGCTCAACCTTGA 1992 0.4297 MGVNNNNNRVVDHFVCHGKTITIQSEIPIMPPPPPLEIHSVRLPPKRTTFQKLRHRVSEIFFPDDPLHRFKNTTWFVKLLFGVQYLFPIFQWGPQYNLSLLRSDVVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSVLGSSRHLGVGPVSIASLVMGSMLSETLSYTQDPILYLKLAFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTSKMQIVPVLVSVFKQRDEWSWQTIVLGFGFLAFLLIARHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNTAHKIAIIGELPKGLNPPSSNMLFFNGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQAACKLWKVDKLDFLACMCSFFGVLFISVPLGLGIAVAISIFKILLHVSRPNTLVLGNIPGTTIFHNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWVREEEELIKASSGSKLECIILDITAVTAIDTSGIDTLCELRKMLDKRSLQLVLANPVGSVMEKLHQSNILDSFGLKGLYLTVAEAVADISSSWKAQP* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2554 663 PANTHER SULFATE TRANSPORTER 27 663 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod06g2554 663 Pfam Sulfate permease family 101 481 IPR011547 GO:0016021
Dod06g2554 663 PANTHER SLC26A/SULP TRANSPORTER-RELATED 27 663 - -
Dod06g2554 663 Gene3D STAS domain 512 657 IPR036513 -
Dod06g2554 663 ProSiteProfiles STAS domain profile. 532 655 IPR002645 -
Dod06g2554 663 CDD STAS_SulP_like_sulfate_transporter 533 648 - -
Dod06g2554 663 SUPERFAMILY SpoIIaa-like 537 654 IPR036513 -
Dod06g2554 663 TIGRFAM sulP: sulfate permease 88 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod06g2554 663 Pfam STAS domain 533 651 IPR002645 -
Dod06g2554 663 ProSitePatterns SLC26A transporters signature. 130 151 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2554 Dod-Chr6 54723523 54730552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2554 36 663 Inorganic Solute Cotransporters AT3G15990 77.619 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2554 K17471 - gmx:100817604 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2554 06 54723523 54730552 Dod06g2554 06 54723523 54730552 ECH
Dod10g2023 10 41963527 41968280 Dod06g2554 06 54723523 54730552 PCT