Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2541 ATGAAGAAAGAAAACAGTGTCAAATTGAAAGCTGAAGAGCTCCCTGGTCGGTTGACTCGTGCTCGAGCTGCTGCATTTCGTGCATCTGGACAGCTTCCACATTTGAAGGATCCAGCACAGAGAAATCAGAAGCAGCCACTACGAGCTAATCCAAAAAGAGCAGTTTCTGATAATGCTTGTCGTCAACGCAAGAAGAGGGCCGTTCTTCAGGATGTCACTAATGTTTGCTGTCAAAACACATACAGGAGCTGTTTCACCTCAACTAAAATTCAGGCTAAGAAAAGCAAGCTGGCTAATGCTGGTCAAATTAATGTTTCCAAAGTGGCTCCTTCTGTTGTTGTTGAGCAACAAGTTCGGGTTGAGTCCAAAGCAAAGAGTTTGCCAGAAACAGGACTTGAATCAGAAGATGCTGTGTGCTCAAATAATTTGGAAAACAATGCACTTATACGGCTGACTGGCAAAGAGTGTGGCAAGGATGATAAAAGTCAGGCATCTAGAATATCTGATCAGCCTTATCTGCCACCCTCTATATTAACCAAGAAATGTAGCCTTTCTGAAATTCTGGTTGCATCAAAGGATCCAGACATCACTGACATAGATGACAATATTGAAGATCCTCAACTATGCAGCCTCTATGCCGCTGATATCTATAACAACTTGCGTGTTTCTGAGCTTGCAAGAAGGCCGCATCCTAATTATATGGACACAGTTCAACAAGACATTACTCAAAGCATGCGGGGGATACTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAAGTGGGACTAGAAGCTCTTAATCTCACTGTCTATCTCATAGATTGGTTTCTCTCCAGAAATTACATTGAAAGACAGAGACTTCAGCTGCTTGGAATCACATGCATGCTAATAGCCTCGAAGTATGAAGAAATCAATGCCCCTCGTATTGAAGATTTCTGCTACATCACAGACAACACATACACAAAAGCTGAGGTACTGAAAATGGAGAGTCAGGTGCTAAAGTCGTCTGAATATCAACTGTTTGCTCCCACTACAATAACTTTCCTTAGAACTCACGAAATTGTCACTAATCTACTGAAAATTTTTCAGGGTCCTAGCCTTGAATTGGAGTACCTGGCCAATTACCTAGCTGAACTAACACTGATGGACTATAGTTTCTTGAATTTCCTTCCCTCTATCATTGCTGCATCAGCTGTATTTCTTGCCAAATGGACATTAGATCAGTCCAACCATCCATGGAATCCAACTCTTCAACACTATGCCTGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCGTTACAAAAGCTACAGCTGAATGCCAGCGGCTGCCCTTTAACTGCCATTTGCGCGAAGTATAGACAAGACAAGATGCTAACCCACTTTTCAAAGTCAGGCAGTGGAAGTTCATGGCTGCAACATGGTTACACTACAATAGGTACTGCTGGAAGAAATGAGTGCAAGAAGGGTCCTTTATATTCTGTATTCCCTACAAAAGCTGCTGAAGTTTCCACTGTCCAGGATCTTTTTGAACTTATATGCTCAGGACCTTTGCTAGACAAAATAGGTGTGACACAAGAGATGGTGGCAGAGTCCATAGACAAGTGGTTATTATACGGTCGGCTTCTATGCCGTTTGTTTCAACTTAATGAATTGTACTTAACAGTGCCTCAAAAAGCTAGGATCTATCACTATTATATACCAGTCTTCCTTTGGTGTGAAGATCAGATCTCTCAACATCGGTCCTTGTTCAAAAATGAACAAGATATACCTCCTCTAGTTATTGGATTTAGTGCTCCCCAAGGATGTGGAAAGACAACCCTTGTCTTTGCTCTTGCTTATCTTTTCCAAAAGACTGGCAGGAAGTGCACATCAATATCTATAGATGATTTTTATTTAACGGCTGAAGGTCAGAGTAAACTAAGGGAATCTAATCCAGGAAATGCACTTCTTGAGTTCCGTGGAAATGCAGGAAGCCACGATCTTGCTTTGTCTGTTGAAACTCTGACAGCTCTATCCAAAATGACAAGAGGTATGAAGATAAAGCCACCTCGATATGATAAATCTGCATTCAATGGGAGAGGTGACCGTGCTGATCCTTCAACTTGGCCAGAAGTTGAAGGACCCCTTACGGTTGTGTTATTTGAAGGTTGGATGCTAGGCTTCAAGCCCCTTCCAGTGGAAGTTGTAAAGGCTGTTGATCCCCAGCTAGAAACTGTGAATAGAAACCTTGAAGCATATTATGATGCATGGGACAAATTCATAAAATCATGGATAATCATCAAGATTAAGGACCCAAGTTGTGTCTACCAGTGGCGCTTGCAGGCCGAGATTGCTATGAGGGAGGCAGGCAACCCTGGAATGTCTGATGACGAGGTGAGAGATTTTGTTGCTCGCTACCTGCCAGCATACCATGCTTACCTTCCTACACTTTACTCGGAGGGTCCAAATGGGTCAGATCCAAAGCATCTTCTAACCATTGAGATAGATGAAGGCAGAAACCCCATTCTGGCTGCCTAA 2526 0.4256 MKKENSVKLKAEELPGRLTRARAAAFRASGQLPHLKDPAQRNQKQPLRANPKRAVSDNACRQRKKRAVLQDVTNVCCQNTYRSCFTSTKIQAKKSKLANAGQINVSKVAPSVVVEQQVRVESKAKSLPETGLESEDAVCSNNLENNALIRLTGKECGKDDKSQASRISDQPYLPPSILTKKCSLSEILVASKDPDITDIDDNIEDPQLCSLYAADIYNNLRVSELARRPHPNYMDTVQQDITQSMRGILVDWLVEVSEEYKVGLEALNLTVYLIDWFLSRNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCYITDNTYTKAEVLKMESQVLKSSEYQLFAPTTITFLRTHEIVTNLLKIFQGPSLELEYLANYLAELTLMDYSFLNFLPSIIAASAVFLAKWTLDQSNHPWNPTLQHYACYKASDLKTTVLALQKLQLNASGCPLTAICAKYRQDKMLTHFSKSGSGSSWLQHGYTTIGTAGRNECKKGPLYSVFPTKAAEVSTVQDLFELICSGPLLDKIGVTQEMVAESIDKWLLYGRLLCRLFQLNELYLTVPQKARIYHYYIPVFLWCEDQISQHRSLFKNEQDIPPLVIGFSAPQGCGKTTLVFALAYLFQKTGRKCTSISIDDFYLTAEGQSKLRESNPGNALLEFRGNAGSHDLALSVETLTALSKMTRGMKIKPPRYDKSAFNGRGDRADPSTWPEVEGPLTVVLFEGWMLGFKPLPVEVVKAVDPQLETVNRNLEAYYDAWDKFIKSWIIIKIKDPSCVYQWRLQAEIAMREAGNPGMSDDEVRDFVARYLPAYHAYLPTLYSEGPNGSDPKHLLTIEIDEGRNPILAA* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2541 841 PANTHER URIDINE KINASE 473 840 - -
Dod06g2541 841 SMART Cyclin_C_2 344 467 IPR004367 -
Dod06g2541 841 MobiDBLite consensus disorder prediction 28 56 - -
Dod06g2541 841 Pfam Cyclin, C-terminal domain 344 461 IPR004367 -
Dod06g2541 841 SUPERFAMILY Cyclin-like 344 460 IPR036915 -
Dod06g2541 841 Gene3D - 215 460 - -
Dod06g2541 841 CDD CYCLIN 344 436 IPR013763 -
Dod06g2541 841 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 802 IPR027417 -
Dod06g2541 841 SUPERFAMILY Cyclin-like 204 340 IPR036915 -
Dod06g2541 841 SMART cyclin_7 251 335 IPR013763 -
Dod06g2541 841 SMART cyclin_7 354 438 IPR013763 -
Dod06g2541 841 PANTHER BNAC06G40610D PROTEIN 473 840 - -
Dod06g2541 841 CDD CYCLIN 245 334 IPR013763 -
Dod06g2541 841 Gene3D - 571 840 IPR027417 -
Dod06g2541 841 Pfam Cyclin, N-terminal domain 215 340 IPR006671 -
Dod06g2541 841 Gene3D - 229 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2541 Dod-Chr6 54502004 54513135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2541 1 460 Core Cell Cycle Gene Families AT1G80370 51.915 1.06e-143 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2541 K15918 - gmx:100806896 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2541 06 54502004 54513135 Dod06g2541 06 54502004 54513135 ECH