Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2508 ATGGACGAGGACCAAGAGATGGAGACATTTGGGATGGAGAATGATTTTGAAGGAGGCCAATGGATTGGTGGCGAGTATTACTATCGGAAGCGCAAAGAGAAGCGTAGTCAGACCAGAGAAGATGTTCTTTACGGAGTTTTTGCAGACTCTGATGATGATGAAGATGATTATTCTAGTAGAAAACGTAGGAAGGACCGCGACCTATCGAAGAAGCCTGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGGACTTTCATGCCTAGTCAAGATGCTGATGACAATTCTAAAGAACAGGATGAGAAAGATAGCTATGCTAGTGAGGACAGGCCAGGATTAGGTCTTGGCATGGGGTCTGCTAGCACTTCTGGAGCTGGTTTAGGTTTTAATTCTGGTTATGCAGCAAATGGTTCTGATAGGAATGATGATTCTGATGAGAATGGTGATGATAAATTTCTACCTACGGCATTCGGGAAGAAGATTAAGGAGGGAGCAATGAGGAGGGAAAGAGAGAAGGAGAGGCAGAAATTGGAGAAGAGAGGTCAGCGTCAAAGTCAAGGCCAAGATGGATTTGCTGATGTTGGGAAATTCGAGAAGCATACAAAGGGAATAGGAATGAAGCTGTTGGAGAAGATGGGTTATAAAGGAGGTGGTCTTGGGAGGAATGAGCAAGGTATTGTTGCTCCTATTGAGGCAAAGTTGAGGGCTAAAAATTCTGGTATTGGATTTGGCAACTCTAAGGAGACTATGCCATTGCCTGCTTTGCAGCAAGAGAATAAGAGCTTGCCAGGAACCACCCAACCTACAGCTGTCAGAGCAAAGGATAGGCTATGGTCAAAGCAATCCAGGTTGAAGAAGAAGAAAGAGGAGGAAGAGTATATTACTGCTGAGAAGTTGTTAGAAAGCAAGCAAGAACAGGATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGACCGCAGGTTCGAGTATATACAAATTTGTCTGATTTGAATGCTGAGGAGAAAGCAAAGGAAAATGATGTCCCGATGCCAGAACTTCAGCATAATATAGGGTTAATTGTTCGGTTGGCCGAGGCTGACATCCAGGAAATTGATAGAGATTTGAGGAGAGAGAGGGAGACAGCACTTAGCTTGAAAAAAGAAAAGGAGAAGTTAGAAGCTGAGGCAGAATTCCAAAAGAAGCAGCTGGACAATTTGGAGGAAATAATGAGTGTGTTGGACCGAATCGGAGAAGAGAGCACTTTAGGAACACTTACACTAGATTCCCTTGCTCAATGTTTTAGTGACTTGCATAAAAGATATGCTGATAACTACAAGTTGTGTAACTTGTCACACATTGCTTGCTCATATGCTCTTCCTTTGTTTATCAGAGTGTTCCAAGGTTGGGATCCTCTTCGAAATCCATCTCATGGGATGGAGTTGGTATCTACATGGAAGACTTTGCTTCAAGGTGAAGAGTGTCTTGATATATGGGATGTATCATCACCTTATACCCAGTTGATTTCTGAGGTTGTATTGCCAGCTGTCAGAATATCTGGTATCAATACTTGGCAGGCACGGGATCCAGAGCCAATGTTGCGGTTTCTGGATTCATGGGAAAAGTTGCTTCCTCCTTCAGTCCTCACTACCATACTGGACAATATAGTCTTGCCAAAATTGTCAGCTGCTGTAGATACTTGGGAACCACATCGCGAGACCATTCCTATTCACACTTGGGTGCATCCGTGGTTACATCTGATAGGACACAGGCTGGAGGGTATATACCAGGTAATTCGTTTTAAATTGAGTTCTGTTCTTGGTGCCTGGCATCCAAGTGATGAATCTGCGTATACCATACTGTCTCCCTGGAAGCCTGTCTTTGATTCAGCAAGTTGGGAGCAACTTATGCTTCGTTTTATTGTACCTAAGTTGCAGCTTGTCTTGCAAGAGTTCCAAATTAACCCGCGTAATCAGAAGCTTGATCAGTTTTATTGGGTAATGAAGTGGGCTTCTGTTATTCCAATTCATCTCATGGTTGACATGATGGAGAAGTTCTTCTTCTCCAAGTGGCTTCAGGTTTTATACCAATGGTTGTGCTCAACAAATCCTAACTTTGATGAAGTCATAAAATGGTATAATGGCTGGAAAGAACTTATTCCAAAAGAATTATATGCAAATGAAAGTATTCGATACCAGATTAAACATGGTATTGAAATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTAAAGGAGAATATCAGCTATATTAGGGTACGTGAGCAGAGGGAATTTGAGGCTCAGCAGAAAGCAACAACCTATGCTCAACAGCAAGCTGCTGCAGCCTCTGCTGGTGTCAATGCAGATGGTGTGGCTGGTGTGCATGAGTTGAGCTTGAAAGAAGTCATTGAGGCCCATGCCCAGCAGCATGGTTTGCTGTTCAAGCTTAAACCTGATAGAACGCACAATGGTCATCAAATATATGGGTTTGGTAACGTGAGCATAATAATAGACTCTCTACATCAGAAGGTATATGCCCAAAATGAGGGAACATGGTCTTTGGAATCTCTTCAAGGCTTGTTAGAGTTGCATAATAAATCCCTTAGTAAAAGACGCTGA 2613 0.4298 MDEDQEMETFGMENDFEGGQWIGGEYYYRKRKEKRSQTREDVLYGVFADSDDDEDDYSSRKRRKDRDLSKKPDLTKPVNFVSTGTFMPSQDADDNSKEQDEKDSYASEDRPGLGLGMGSASTSGAGLGFNSGYAANGSDRNDDSDENGDDKFLPTAFGKKIKEGAMRREREKERQKLEKRGQRQSQGQDGFADVGKFEKHTKGIGMKLLEKMGYKGGGLGRNEQGIVAPIEAKLRAKNSGIGFGNSKETMPLPALQQENKSLPGTTQPTAVRAKDRLWSKQSRLKKKKEEEEYITAEKLLESKQEQDLEVVQKVYDMRGPQVRVYTNLSDLNAEEKAKENDVPMPELQHNIGLIVRLAEADIQEIDRDLRRERETALSLKKEKEKLEAEAEFQKKQLDNLEEIMSVLDRIGEESTLGTLTLDSLAQCFSDLHKRYADNYKLCNLSHIACSYALPLFIRVFQGWDPLRNPSHGMELVSTWKTLLQGEECLDIWDVSSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLDSWEKLLPPSVLTTILDNIVLPKLSAAVDTWEPHRETIPIHTWVHPWLHLIGHRLEGIYQVIRFKLSSVLGAWHPSDESAYTILSPWKPVFDSASWEQLMLRFIVPKLQLVLQEFQINPRNQKLDQFYWVMKWASVIPIHLMVDMMEKFFFSKWLQVLYQWLCSTNPNFDEVIKWYNGWKELIPKELYANESIRYQIKHGIEMMNQAVEGMEVVQPGLKENISYIRVREQREFEAQQKATTYAQQQAAAASAGVNADGVAGVHELSLKEVIEAHAQQHGLLFKLKPDRTHNGHQIYGFGNVSIIIDSLHQKVYAQNEGTWSLESLQGLLELHNKSLSKRR* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2508 870 MobiDBLite consensus disorder prediction 76 92 - -
Dod06g2508 870 SMART G-patch_5 199 244 IPR000467 GO:0003676
Dod06g2508 870 ProSiteProfiles G-patch domain profile. 201 246 IPR000467 GO:0003676
Dod06g2508 870 Coils Coil 355 403 - -
Dod06g2508 870 Pfam Tuftelin interacting protein N terminal 4 104 IPR022159 -
Dod06g2508 870 MobiDBLite consensus disorder prediction 93 108 - -
Dod06g2508 870 PANTHER TUFTELIN-INTERACTING PROTEIN 11 9 857 - -
Dod06g2508 870 Coils Coil 286 306 - -
Dod06g2508 870 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 9 857 IPR045211 GO:0000390
Dod06g2508 870 Pfam GC-rich sequence DNA-binding factor-like protein 421 688 IPR022783 -
Dod06g2508 870 MobiDBLite consensus disorder prediction 30 196 - -
Dod06g2508 870 MobiDBLite consensus disorder prediction 139 183 - -
Dod06g2508 870 PIRSF TFIP11 1 865 IPR024933 -
Dod06g2508 870 MobiDBLite consensus disorder prediction 123 138 - -
Dod06g2508 870 MobiDBLite consensus disorder prediction 54 73 - -
Dod06g2508 870 Pfam G-patch domain 201 242 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2508 Dod-Chr6 54135861 54140037 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2508 201 242 C2H2 Transcription Factor Family AT5G26610 47.619 7.34e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2508 K13103 - gmx:100781621 1366.67