Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2486 ATGCAGATTGCAGTGAAGAGATTGAAAGTTTGGAGCAATAAAGCTGACATGGAATTTGCTGTTGAAGTTGAAATATTGGCAAGAGTACGGCACAAGAATCTTCTTAGTCTCCGTGGCTATTGTGCTGAAGGGCAGGAACGGTTGATTGTATATGACTATATGCCAAATCTGAGCTTGGTCTCCCATCTTCATGGATCCCATTCGGCAGAATGCCTTCTTGATTGGAATCGACGGATGAACATTGCAATTGGGTCTGCTGAGGGGATTGTATATCTTCACCACCAAGCAACGCCGCATATCATCCACAGAGATATTAAAGCAAGCAACGTGTTGCTGGATTCAGATTTCCAGGCCCGGGTTGCTGATTTTGGTTTTGCGAAGTTGATACCTGATGGGGCGACGCATGTGACTACAAAAGTTAAGGGTACTTTGGGCTACCTTGCACCAGAATATGCTATGTTAGGCAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGTATTCTCCTTCTAGAACTTGCTAGCGGCAGAAAACCAATTGAAAAGCTTAGTTCATCGGCTAAGCGACCAATAGTCGATTGGGCATTGCCATTGGTCTGTGAGAGGACATTCAGTGAACTTGCTGATCCAAGGCTAAATGGTAACTATGTAGAGGAAGAGCTTAAAAGGGTTATTTTTGTTGCATTGATATGTGCTCAGAATCAACCTGAGAAGAGACCTACCATGCTTGATGTGGTAGAGTTACTGAAGGGAGAAGCTAAACATAAACTTTCTCAGATAGAGAATAGTGAAATGTTTAAAAGCACTCCACCTGCAGAATACAATGATGGGAAATCAGCAGCTGAAGACAGTTCAGACTTCATCTCAGAGGAAAGAGAAATAAAACATGACCTGAAAGAAAAGACTGGTCTGTGA 915 0.4262 MQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLVSHLHGSHSAECLLDWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGRKPIEKLSSSAKRPIVDWALPLVCERTFSELADPRLNGNYVEEELKRVIFVALICAQNQPEKRPTMLDVVELLKGEAKHKLSQIENSEMFKSTPPAEYNDGKSAAEDSSDFISEEREIKHDLKEKTGL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2486 304 MobiDBLite consensus disorder prediction 260 304 - -
Dod06g2486 304 PIRSF ILK 1 269 - -
Dod06g2486 304 SMART serkin_6 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2486 304 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Dod06g2486 304 PANTHER OS01G0253100 PROTEIN 2 280 IPR045271 GO:0004714|GO:0006468
Dod06g2486 304 Gene3D Transferase(Phosphotransferase) domain 1 55 267 - -
Dod06g2486 304 SUPERFAMILY Protein kinase-like (PK-like) 2 249 IPR011009 -
Dod06g2486 304 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g2486 304 MobiDBLite consensus disorder prediction 279 304 - -
Dod06g2486 304 Pfam Protein tyrosine and serine/threonine kinase 1 249 IPR001245 GO:0004672|GO:0006468
Dod06g2486 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Dod06g2486 304 PANTHER - 2 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2486 Dod-Chr6 53854069 53855654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2486 3 287 Trihelix Transcription Factor Family AT1G70460 47.059 3.34e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Dod06g2486 PK_Tyr_Ser-Thr 3.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2486 - - rcu:8282354 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2486 06 53854069 53855654 Dod06g2486 06 53854069 53855654 ECH
Dod10g2106 10 42942233 42950970 Dod06g2486 06 53854069 53855654 PCT