Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2463 ATGGATTATCACATCAATCATTGGCCCGGCAGCACTTTGCAGCAGTCGCCACAAGGCCTCATCAGTGTCCCTGTGGCTAACCATGTCCTAGCCACCATGGACAGTTCAATCTCTGAACAAACAAACCTGCAGGAGATTATGAGTAGCAACAACAACAATAATGAGCATGCCTTGTCTCCAAAAAGCTTTATAGTGTCTTATGATGAGAACTCCAATGCACCCTTTTTAGTTCCAGCATCATCATCAGGGGCTAGCCAAAGAACGAATAAGAAGAATAGAAGAACCTCTGAGACACTAGATCACATTCTGTCCGAGAGGAAAAGGAGACAGGAACTCACAAGGAAGTTCATAGCCCTTTCAGCCACTATACCCGGCTTGAAGAAGATGGAAAAAGCTTATGTACTTAGCGAAGCTAACAAATACGTGAAACAACTTCAAGAGCGAGTGAGAGAGCTAGAAGAAGGTATCAAGAAAAGCAATGAAGAATCAGCAATAGTCGTATCAAAATGCCATCTCCACGTTGACGAAGGCAATACTACTACTTTGTGCGAAACCAACTCATCAATTGGATGCCACAGACACAGTGGAACACTCCCTGACGTTAAAGCAAGTGTCTTAGGAAAGGACATACTCTTCAAGATTCACTGTGGGAAACAAAAAGGCATTCTGCCCGAAATATTGTCCCAGATTCAGAGTGACGTCCATCTCTCCATAGTTAGTAGTAACGTCTTGCCGTTTGGAAATACACTTGACATCACCATAGTTGCTAAGATGGGTGATAATTGCAGCAAGATAGTGGAGGATGTTGTGAAAAATCTGAGAGTGGCTTTGCTGAAGTCATGTAATGTGCAACGCGATGCGTCCTAG 867 0.436 MDYHINHWPGSTLQQSPQGLISVPVANHVLATMDSSISEQTNLQEIMSSNNNNNEHALSPKSFIVSYDENSNAPFLVPASSSGASQRTNKKNRRTSETLDHILSERKRRQELTRKFIALSATIPGLKKMEKAYVLSEANKYVKQLQERVRELEEGIKKSNEESAIVVSKCHLHVDEGNTTTLCETNSSIGCHRHSGTLPDVKASVLGKDILFKIHCGKQKGILPEILSQIQSDVHLSIVSSNVLPFGNTLDITIVAKMGDNCSKIVEDVVKNLRVALLKSCNVQRDAS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2463 288 MobiDBLite consensus disorder prediction 76 97 - -
Dod06g2463 288 SMART finulus 102 151 IPR011598 GO:0046983
Dod06g2463 288 Coils Coil 135 162 - -
Dod06g2463 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 162 IPR036638 GO:0046983
Dod06g2463 288 PANTHER BHLH TRANSCRIPTION FACTOR 41 283 - -
Dod06g2463 288 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 41 283 - -
Dod06g2463 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 145 IPR011598 GO:0046983
Dod06g2463 288 Gene3D - 84 162 IPR036638 GO:0046983
Dod06g2463 288 Pfam Helix-loop-helix DNA-binding domain 101 146 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2463 Dod-Chr6 53354904 53358470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2463 84 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.898 1.08e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod06g2463 HLH 2.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2463 - - gmx:100795184 232.646