Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2441 ATGGACCTTCAAAGGTCAGAGCCATGTCAATCTGAAAATATGAACATCTCATTTTCAGAGCCAAAACCTTCTTCTGTGGATGTCCAGAAGGAGAAGGGACACACAGAAAAGGAAGATCAAAAACTTCTTCTACTTGATCTAAGTCTCTCCAGCAAGGACTCATGTGATGATGTCTCAAAGCCAGAACTCAACCTCCTCAATTGTTTTGACACAAATTCATCAGAGAATTCCTCAGAGTCTAGTCATGGAAATAATGAACTAGAGCATAGGACTTTCTCATGCAACTATTGCCAGAGAAAGTTTTACAGTTCACAGGCACTTGGGGGACACCAGAATGCACACAAGCGCGAAAGGACTTTGGCAAGAAGAGGGTACAAGGCTGGTGCTGCTGCTGCTGCTGCAGTTTCAGTAGATTTTGGAAACAGGTTCTCTAGCATGGCTTCTTTGCCTTATAACAGATCACTTGGAATTCAGGTGCATTCTATGATCAATAAACCTTCTTATCAAACACCCTTTTTTGGTTTGTCCCCAAATGGATGGAAGAGGCAGCCTTTGGATTCACAGCCTGCAATTGGGAAGCTTTCATCTAGCAACTTTCATGTTAGAGCAGAAACTGAATCACCATCCTTGGCTTCTGGCATTCCAAGGTTGGGGAAGTTTTCTACAGTGGCACAAGGATTGGGAGGTTACTGGTTTGGTGGTGTTACCAATTTGAAGTCCAAACAAGAGAAGCTGCAGAAGCTTGACTTGTCCCTCAAGCTCTAA 765 0.434 MDLQRSEPCQSENMNISFSEPKPSSVDVQKEKGHTEKEDQKLLLLDLSLSSKDSCDDVSKPELNLLNCFDTNSSENSSESSHGNNELEHRTFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGYKAGAAAAAAVSVDFGNRFSSMASLPYNRSLGIQVHSMINKPSYQTPFFGLSPNGWKRQPLDSQPAIGKLSSSNFHVRAETESPSLASGIPRLGKFSTVAQGLGGYWFGGVTNLKSKQEKLQKLDLSLKL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2441 254 MobiDBLite consensus disorder prediction 1 24 - -
Dod06g2441 254 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Dod06g2441 254 MobiDBLite consensus disorder prediction 25 39 - -
Dod06g2441 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Dod06g2441 254 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 31 254 - -
Dod06g2441 254 Gene3D Classic Zinc Finger 70 139 - -
Dod06g2441 254 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 31 254 IPR044246 GO:0009788
Dod06g2441 254 MobiDBLite consensus disorder prediction 1 39 - -
Dod06g2441 254 SUPERFAMILY beta-beta-alpha zinc fingers 89 119 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2441 Dod-Chr6 53122042 53123025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2441 12 254 C2H2 Transcription Factor Family AT5G10970 42.578 1.97e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod06g2441 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2441 - - gmx:102666245 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2441 06 53122042 53123025 Dod06g2441 06 53122042 53123025 ECH