Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2439 ATGGACAATGAGGAAATCCCATCAGTACCTTCTACACCTGCAACACCAGGCACTCCTGGTGCCCCTCTTTTTGGTGGGTTTAGGCATGAGAGAAATGGTAATGGTATTGGTAGAAAGTCACTCCTCAAGGGTTGCAAATGTTTCAGTGTTGAAGAATGGACCATAGAAGATGGGGCCTTACCAAAAGTCTCTTGCTCTTTGCCACCCCCTCCTGTCCCTCTTGCTAGAAAGGTTGGAGCTGAGTTTATAGGAACCTTCATTCTCATGTTTGCTGCGACTGCAGCTGCTATTGTGAACCAAAAGACACAAGGCTCAGAGACTCTGATTGGATGTGCTGCCACCGCTGGCCTTGCTGTTATGGTCATCATCCTCTCCACTGGCCACATATCCGGTGCTCATCTCAACCCTGCAGTGCCTGTGTATATTGTTGCACAAGTCATGGCATCTATTTGTGCTGGATTTGCTCTCAAGGGTGTTTATCACCCATTCATGGGAGGGGGAGTCACGGTTCCTTCTGTTGGATACGGCCAAGCTTTTGCTTTAGAATTCATCATCAGCTTTAATCTCATGTTTGTTGTCACTGCAGTGGCCACCGACACTCGAGCTGTTGGAGAGCTCGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTTATAGCCGGGCCAGCTACAGGAGGTTCAATGAACCCAGTGAGAACACTTGGTCCAGCAATTGCTGCAAACAACTACAAAGCCATATGGGTGTATCTCATAGCTCCCATACTTGGAGCATTAGGTGGGGCAGGTGCCTACACTGCGGTCAAGCTTCCTGATGAAGATGATAACCCCCAAGTAAAGGTCCCTTCAAATCCTGGGAGCTTCAGAAGGTGA 876 0.492 MDNEEIPSVPSTPATPGTPGAPLFGGFRHERNGNGIGRKSLLKGCKCFSVEEWTIEDGALPKVSCSLPPPPVPLARKVGAEFIGTFILMFAATAAAIVNQKTQGSETLIGCAATAGLAVMVIILSTGHISGAHLNPAVPVYIVAQVMASICAGFALKGVYHPFMGGGVTVPSVGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGGSMNPVRTLGPAIAANNYKAIWVYLIAPILGALGGAGAYTAVKLPDEDDNPQVKVPSNPGSFRR* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2439 291 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g2439 291 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g2439 291 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g2439 291 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g2439 291 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g2439 291 Pfam Major intrinsic protein 74 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod06g2439 291 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 38 63 - -
Dod06g2439 291 SUPERFAMILY Aquaporin-like 73 278 IPR023271 -
Dod06g2439 291 Gene3D Glycerol uptake facilitator protein. 72 282 IPR023271 -
Dod06g2439 291 PANTHER AQUAPORIN NIP2-1 3 279 IPR034294 -
Dod06g2439 291 PANTHER BNAA02G36290D PROTEIN 3 279 - -
Dod06g2439 291 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2439 Dod-Chr6 53081970 53087405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2439 1 291 Major Intrinsic Protein MIP AT1G80760 74.277 1.15e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2439 K09874 - cit:102629705 410.223