Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2435 ATGTCAGGTGATGAAGGTGGTGTTGTGGTCCCTGAGCCAGTACCTGCCATTGGTGAGCCAATGGACATCATGACTGCCTTACAGCTTGTGCTAAGGAAGTCACTTGCTTATGGTGGTCTTGCACGAGGCCTTCATGAGGGTGCTAAGGTGATTGAGAAGCGTGCTGCACAGCTTGTTGTTCTGGCTGAGGATTGTGACCAGCCCGACTATGTTAAGCTTGTCAAGGCCCTTTGTGCAGAGCACAATGTTAGCTTGCTGACAGTTCCAAGCGCTAAGACCCTTGGAGAGTGGGCTGGTTTGTGCAAGATTGATTCAGAAGGAAAAGCTAGGAAGGTGACTGGTTGCTCGTGCGTGGTTGTCAAGGATTTTGGAGAGGAACATGAAGCCTATAATGTTGTCCTTCAGCATGTGAAGTCCCAATGA 423 0.4965 MSGDEGGVVVPEPVPAIGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKRAAQLVVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSQ* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2435 140 Gene3D - 10 140 IPR029064 -
Dod06g2435 140 SUPERFAMILY L30e-like 19 138 IPR029064 -
Dod06g2435 140 PANTHER 40S RIBOSOMAL PROTEIN S12 1 140 - -
Dod06g2435 140 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 26 119 IPR004038 -
Dod06g2435 140 PRINTS Ribosomal protein S12E family signature 85 106 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dod06g2435 140 PRINTS Ribosomal protein S12E family signature 30 43 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dod06g2435 140 PRINTS Ribosomal protein S12E family signature 110 123 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dod06g2435 140 PRINTS Ribosomal protein S12E family signature 44 60 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dod06g2435 140 PANTHER 40S RIBOSOMAL PROTEIN S12 1 140 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dod06g2435 140 ProSitePatterns Ribosomal protein S12e signature. 26 44 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2435 Dod-Chr6 53029005 53030728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2435 17 140 Cytoplasmic Ribosomal Protein Gene Family AT1G15930 77.419 3.80e-67 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2435 K02951 - gmx:100499723 248.825