Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2433 ATGCCTGCTGCATTAGTTTCCGGCCAAAGCCAAAGCCAAACGGTGTGTGTCACCGGTGCTGGTGGGTTCATAGCCTCTTGGCTCGTCAAGCTTCTCTTAGAGAAAGGCTACACTGTCAGAGGAACCCTGCGAAACCCAGATGATCCGAAGAATGGACACTTGAAGGAGTTGGAAGGAGCCAAGGAAAGGCTAACTCTGCATAAAGTTGACCTCCTTGATTTTGACTCTATTAAAGCTGTTTTCCATGGTTGTGATGGAGTCTTTCACACGGCCTCTCCAGTCACTGACAACCCTGAAGAGATGTTGGAGCCAGCAGTGAATGGAACCAAGAATGCGATCATAGCAGCTGCAGAAGCCAAAGTGAGACGCGTGGTGTTCACTTCTTCAATTGGGACTGTCTATATGGACCCCAATAGGAGCAGGGATGTGATGGTTGATGAGTCCTGCTGGAGTGATTTGGACTATTGCAAGAACACCAAGAACTGGTATTGCTATGGGAAGACTGTGGCTGAACAAGTTGCATGGAGTGCAGCTAAAGAGAAGGGGGTGGACTTAATTGTTGTGAACCCGGTCTTGGTTCTTGGACCATTACTACAATCCACCATCAATGCTAGCACAATTCACATCCTCAAGTACCTCACTGGCTCTGCCAAGACTTTTGTGAATGCAGCTCAGGCTTACGTGCATGTTAGGGATGTGGCATTGGCCCACATTCTAGTTTATGAGACACCTTCTGCTTCTGGCAGATACATATGTTCCGAAACTTCTTTACACCGTGGAGAGCTAGTTGCAATTCTGGCCAAGTTTTTCCCTGAGTACCCAATTCCTACCAAATGTTCAGATGAAAAGAACCCCAGAGTAAAACCCTACACATTTTCAAATCAAAAGCTGAAGGATTTGGGATTGGAATTCACCCCAGTGAAGCAGTGTCTGTATGAAACCGTTAAGAACCTGCAGGAGAAAGGCCACCTTCCTCTCCCAGCAAACCAAGAAGACCCCATCAAAGTTAAATCCTAG 1017 0.47 MPAALVSGQSQSQTVCVTGAGGFIASWLVKLLLEKGYTVRGTLRNPDDPKNGHLKELEGAKERLTLHKVDLLDFDSIKAVFHGCDGVFHTASPVTDNPEEMLEPAVNGTKNAIIAAAEAKVRRVVFTSSIGTVYMDPNRSRDVMVDESCWSDLDYCKNTKNWYCYGKTVAEQVAWSAAKEKGVDLIVVNPVLVLGPLLQSTINASTIHILKYLTGSAKTFVNAAQAYVHVRDVALAHILVYETPSASGRYICSETSLHRGELVAILAKFFPEYPIPTKCSDEKNPRVKPYTFSNQKLKDLGLEFTPVKQCLYETVKNLQEKGHLPLPANQEDPIKVKS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2433 338 Gene3D - 6 338 - -
Dod06g2433 338 Pfam NAD dependent epimerase/dehydratase family 15 246 IPR001509 -
Dod06g2433 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 328 - -
Dod06g2433 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 318 IPR036291 -
Dod06g2433 338 CDD FR_SDR_e 15 302 - -
Dod06g2433 338 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 7 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2433 Dod-Chr6 52997567 53004671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2433 13 278 Monolignol Biosynthesis Gene Families AT1G80820 75.564 8.93e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2433 K09753 - gmx:100799994 583.563