Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2432 ATGGCTTCTGAGCAACCGCAATTCATTAGTGGCACGGGTAACAACAGCTGCACAAATGCACCCCTCATAGAGAGCATTGATGTTGACCAAGTTGTTATACCTGATAAGAGAAGCTGGAAAAATTTATTTGCATACATAGGGCCTGGTTTTCTTGTTTCCATTGCATACATAGACCCAGGAAACTTTGAGACAGATCTTCAATCAGGGGCACAATATAAATATGAGTTACTTTGGATCGTATTGGTGGCATCATGTGCTGCTCTTGTAATTCAATCAATGGCTGCCAATCTTGGGGTTGTCACTGGAAAGCACTTGGCAGAGCATTGTAGAGCTGAATATTCTAGGGTTCCCAACTTTATCCTTTGGATTATCGCCGAAATTACCGTTGTGGCTTGTGACATTCCAGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCCACATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGCACATTGATCCTCTTAGCATTACAGCAATATGGGATTAGGAAACTTGAATTCTTGATTGCGTTTCTGGTATTTACAATGGCTGGTTGCTTTATAGCTGAGCTTGGATATGCAAAGCCTGATGCCAAAGAAGTTGTAAAGGGTCTTTTTGTCCCTCAACTTAAGGGGAATGGCGCTGCTGGTCTTGCAATTTCACTCCTTGGGGCTTTGGTTATGCCGCACAATCTCTTCCTCCACTCAGCTCTGGTGCTTTCCAGGAAAATACCGCGATCAGCTCGTGGAATCAAAGAGGCTTGCAGATTTTACATGATAGAAAGTGGCTTTGCTCTTGCGGTGGCCTTCCTCATAAATATTTCTATTATTTCTGTAAGTGGTGCAGTTTGCAATTCTTCAAGTTTGAGTGCAGAAGATCAGATGAGTTGTCAGGATTTGGATTTGAACAAAGCCTCCTTTCTACTAAAAAATGTCTTAGGAAAATGGAGTTCAACACTATTTGGAGTTGCTTTGCTTGCATCAGGTCAAAGTTCTACTATAACAGGAACATATGCAGGGCAATATGTCATGCAGGGGTTTCTTGACTTGCGACTTGAGCCATGGATTCGGAATCTGATAACTCGATGCATAGCCATAGTTCCTAGTTTGATTGTTGCATTGATTGGTGGCTCTGCTGGTGCTGGGGAGCTCATTATAATTGCATCAATGATTTTGTCATTTGCGCTTCCATTTGCTTTGATTCCCCTTCTCAAGTTCACTAGCAGCAAAACCAAGATGGGAGAACATGTTAATTCAGTCATGATCTCGGCTGTTACTTGGATCATTGGTTCCCTTATCATGGTCATAAATATATACTATTTACTCTCCAGCTTCATAAAGTTGCTTCTTCACAGCCACATAAAAATTGTTGGAAAGGTGTTTCTTGGGATATTAGGATTTTCAGGTGTGGCAGTGTATCTAGCTGGTATTGCATGTCTTGTGTTCCGCAGAAATAGAAAGGCTACAACCCTTTTGGCACTAACAACACAGAATGATCAGCAAATGGCCAATGAACAAGGCAATGAGTCAATGTATCGTCTCCCTAGAGAAGACATAGTAAGCATGCAATTGCCTGAGAGAATTAGTCCAGCAGAATTTGACTGA 1620 0.4191 MASEQPQFISGTGNNSCTNAPLIESIDVDQVVIPDKRSWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIVLVASCAALVIQSMAANLGVVTGKHLAEHCRAEYSRVPNFILWIIAEITVVACDIPEVIGTAFALNMLFHIPVWIGVLLTGLSTLILLALQQYGIRKLEFLIAFLVFTMAGCFIAELGYAKPDAKEVVKGLFVPQLKGNGAAGLAISLLGALVMPHNLFLHSALVLSRKIPRSARGIKEACRFYMIESGFALAVAFLINISIISVSGAVCNSSSLSAEDQMSCQDLDLNKASFLLKNVLGKWSSTLFGVALLASGQSSTITGTYAGQYVMQGFLDLRLEPWIRNLITRCIAIVPSLIVALIGGSAGAGELIIIASMILSFALPFALIPLLKFTSSKTKMGEHVNSVMISAVTWIIGSLIMVINIYYLLSSFIKLLLHSHIKIVGKVFLGILGFSGVAVYLAGIACLVFRRNRKATTLLALTTQNDQQMANEQGNESMYRLPREDIVSMQLPERISPAEFD* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2432 539 Pfam Natural resistance-associated macrophage protein 62 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PRINTS Natural resistance-associated macrophage protein signature 174 195 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PRINTS Natural resistance-associated macrophage protein signature 224 247 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PRINTS Natural resistance-associated macrophage protein signature 334 353 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PRINTS Natural resistance-associated macrophage protein signature 394 413 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PRINTS Natural resistance-associated macrophage protein signature 149 168 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PRINTS Natural resistance-associated macrophage protein signature 121 147 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PRINTS Natural resistance-associated macrophage protein signature 362 379 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 41 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 8 539 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 Hamap Divalent metal cation transporter MntH [mntH]. 34 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod06g2432 539 PANTHER METAL TRANSPORTER NRAMP1 8 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2432 Dod-Chr6 52989535 52995646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2432 1 534 Inorganic Solute Cotransporters AT1G15960 77.903 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2432 K21398 - gmx:100797298 887.1