Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2429 ATGGATTGTTCTTCATATATTAACACTTCCTTGGATCTCAATATTAATCCTTACGGAGTTCATGAAGAAGTTCCAAAAAAGGTGGTGGAAAGCAATTTTTTCTCACTGGGGATGACCAAGTTTCCTGTGAAGGGAGAGTCTACTGGTGACTTGGAGGAGGAACTGAAGCGTGTGACTGCAGAAAACAAGAAATTGGTAGAGATGCTCTCAGTGGTGTGTGAGAACTACAACACTTTGAAGAGCAATTTGATGGAATATATGAGGAAAAGTACTGAGAAGGAGCTCAGCCCCTCATCAAGGAAAAGGAAGTCTGAAAGCATTAACAACAACTGTGACCAAATGGCACTGGCAATTAATAATGGAAACTCAGAGAGCAGCTCCACTGATGAAGAATCATGCAAGAAGCCGAGGGAAGAACCAATCAAGGCTAAAGTTTCAAGAATTTATGTCAGGACAGAAGCATCTGATACAAGCCTTATTGTTAAAGATGGATACCAATGGAGGAAATATGGGCAAAAAGTGACAAGAGATAACCCCTGTCCAAGGGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGTCCTGTGAAAAAGAAGGTGCAAAGAAGTATGGATGATCAATCTGTGCTAGTTGCAACTTATGAAGGGGAGCACAATCATCCACACCCTTCTCAGATGGAGGCAACATCCGGATCCAGCCGTTGCATGACCATAGGATCAGTACCTTGTTCAGCATCTCTTAGCTCTTCCGCGCCAACCGTTACTCTTGACTTGACAAAATCTAAGTTCAACAACGATTCCAAGATTACAAAACACAAGGCTGATTCACCTGAAATGCCTCAGTTTTTGGTGGAACAGATGGCTACTTCCTTGACCAAGGACCCCAATTTCAGAGCAGCACTTGTTGCTGCCCTCTCAGGAAGAGTGTTGCACAAGAAGAATTGA 942 0.4299 MDCSSYINTSLDLNINPYGVHEEVPKKVVESNFFSLGMTKFPVKGESTGDLEEELKRVTAENKKLVEMLSVVCENYNTLKSNLMEYMRKSTEKELSPSSRKRKSESINNNCDQMALAINNGNSESSSTDEESCKKPREEPIKAKVSRIYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSMDDQSVLVATYEGEHNHPHPSQMEATSGSSRCMTIGSVPCSASLSSSAPTVTLDLTKSKFNNDSKITKHKADSPEMPQFLVEQMATSLTKDPNFRAALVAALSGRVLHKKN* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2429 313 MobiDBLite consensus disorder prediction 90 107 - -
Dod06g2429 313 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod06g2429 313 Gene3D WRKY domain 144 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod06g2429 313 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 311 IPR044810 GO:0003700
Dod06g2429 313 MobiDBLite consensus disorder prediction 90 109 - -
Dod06g2429 313 PANTHER TRANSCRIPTION FACTOR 1 311 - -
Dod06g2429 313 Pfam WRKY DNA -binding domain 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod06g2429 313 ProSiteProfiles WRKY domain profile. 156 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod06g2429 313 MobiDBLite consensus disorder prediction 118 138 - -
Dod06g2429 313 Coils Coil 48 68 - -
Dod06g2429 313 SUPERFAMILY WRKY DNA-binding domain 158 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2429 Dod-Chr6 52897504 52899702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2429 4 313 WRKY Transcription Factor Family AT1G80840 52.322 9.90e-99 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod06g2429 WRKY 2.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2429 - - gmx:100807966 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2429 06 52897504 52899702 Dod06g2429 06 52897504 52899702 ECH