Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2425 ATGATGTCTCTGAAGATAGCAGCTGAAAGCTGGCCAAAATCACCGTCAAAGAAGGTGGAGGAGCCATTGGTGGTTGTAACAGAGTATGATGAAGATAGACACAAAGTAGCAGTGGAGAAACTTGAGAGGCTTTGTGAAATTGGACAGAGAGGGAAGCCTTCCCTTGTCACTGACCTCATGGGAGACCCCATATGCCGTATCCGTCACTTTCAATTGCATGTCATGCTGGTTGCAGAATATGGAGAAGGAGGAGAAGTTGTTGGGGTGATAAGGGGGTGTGTGAAAACAGTTACAAGAGGGAATTCAGTTTATGTAAAGCTGGCTTATCTTTTGGGGCTAAGGGTCTCCCCTCTACACAGGAGACATGGCATTGGCAAAAAACTGGTTGAACATTTAGAAGAGTGGTGCAAGCAAAATGGGGCTAAGTATGCATATATGGCAACCGATTGTACAAATGAGCCTTCTGTCAATTTGTTCACAAAAAAATGTGGCTACTCAAAGTTCAGGACGCTAACCATGCTAGTGCAACCTGTTCATGCTCACTACAAGCCAATAAGCTCCAACATTGCTGTGCTACACCTTCCACCACGCCTAGCCAGGTCAATGTACAACCACATCTTTGCCAATTCAGAATTTTACCCTATAGACATAGACTTAATTTTATCAAACAAGCTCAATTTGGGCACATTCATGGCCATACCAAACAAGTGCATCTCCAAATGTGATCCAAAGAGGGGCATTCTCCCTCCAAGCTATGCTATATTAAGTGTGTGGAACACCAAAGAAGTGTTCAAATTACAAGTGAAGGGAGTGTCACCACTAGCACATGCATGTTGTGTAGGTACAAGGTTATTAGATGAATGGATGCCTTGGCTAAGGTTACCTTCATTCCCTGATGTATTTAGGCCATTTGGGGTGTATTTTCTTTATGGACTACACATGGAGGGGAAATATGGTAGGCAACTCATGAAGGGTCTATGTGGGTTTGTACATAACATGGCTAGAGATGGTGGTGGATGTGGGGCCATTGTGGCTGAATTGGGCCAAAGGGACCAAGTTAGAGAGGCTGTCCCACATTGGAGCAAATTCTCATGGGCTGAGGACATGTGGTGCATTAAGAATCTTGAGGATGAGAAGCAGGATATCCATGAAAAATGTGGGCCATCCGATTGGTTGACTTCAAGATCCTCCTCTCAAGTAATATTTGTTGATCCTAGAGACTTTTGA 1227 0.4409 MMSLKIAAESWPKSPSKKVEEPLVVVTEYDEDRHKVAVEKLERLCEIGQRGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEGGEVVGVIRGCVKTVTRGNSVYVKLAYLLGLRVSPLHRRHGIGKKLVEHLEEWCKQNGAKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTMLVQPVHAHYKPISSNIAVLHLPPRLARSMYNHIFANSEFYPIDIDLILSNKLNLGTFMAIPNKCISKCDPKRGILPPSYAILSVWNTKEVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFLYGLHMEGKYGRQLMKGLCGFVHNMARDGGGCGAIVAELGQRDQVREAVPHWSKFSWAEDMWCIKNLEDEKQDIHEKCGPSDWLTSRSSSQVIFVDPRDF* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2425 408 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 24 195 IPR000182 GO:0016407
Dod06g2425 408 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 71 171 IPR016181 -
Dod06g2425 408 PANTHER OS12G0561600 PROTEIN 2 408 - -
Dod06g2425 408 Gene3D - 27 176 - -
Dod06g2425 408 Pfam Acetyltransferase (GNAT) family 75 165 IPR000182 GO:0016407
Dod06g2425 408 PANTHER N-ACETYLTRANSFERASE 2 408 - -
Dod06g2425 408 CDD NAT_SF 75 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2425 Dod-Chr6 52854182 52856828 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod06g2425 Acetyltransf_1 1.1e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2425 - - gmx:100799977 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2425 06 52854182 52856828 Dod06g2425 06 52854182 52856828 ECH