Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2421 ATGTCAACAAGCACAAGTGGTGGGATGAAGAATAAGCTAAGTTCTATTCTTGATTTTCTGCCCCTTTCTGGTCGTGGAAGGAAGAATCCATCAAAATCCTTTAGGCTAGGAGTTATGAGAGGATCAGATGGACTTAAAACATTTGGAAGGTCACTGAAAACTGGTGTCACAACTTGGGCAGTGTTCCCAGAAGATCTTAAAGTGTCAGAGAAAAAAGTGCTTGACCCTCAAGACAGGATCCTTCTATATTGGAACAAGTTCTTTGAGATTCTATGCATTTTTTCAATAGCTTGTGACCCTTTCTTCTTTTACCTTCCTTACTTCGACCACAACTCATTTTGCCTTGCCATAGATAACAACCTAGCAGGTTTTACTGTCACACTGAGAACAATATTGGATGCTATTTATCTCCTGCGGATAAGTTTCCAATTCCGCACTGCTTACATTGCACCTTCATCAAGGGTGTTTGGAAGAGGTGAACTTGTCATAGATCCTGCAAAGATTGCCAGCAGATATTTGCAGCGTTACTTCATTGTTGACTTCATTTCTGTGCTGCCGATGCCACAGATTATAGTGTGGAGATATCTTCACAGTTCAAGCCATGCAGAGGTATTGGGTACAAAAACGGCACTGTTGAGAGTTGTCATCCTGCAATATTTCCCAAGATTTGTACGGTTTCTGCCTTTAGCTTCAGAAGTTAAAAAGACAGCTGGTGTTTTCTCTGAAAATGCGCTGCTTGGAGCCACATACTATTTGATCTGGTATATGCTTGCTAGCCATATAATAGGCTCAGTGTGGTACTTACTAGCCATAGAACGTAACGACACATGCTGGAGGCAAGCTTGTTCAGAAGTTGAAGGGTGTAGTACACATTTCTTGTACTGTGGGAATTCAAATAATGATCTTCCAGGGTATGGAAATTGGAGAAATATGAGTGAGAATGTTCTTAGAAGTCGCTGCTTTGTGAGTGATGATAACCCACCATTTAATTATGGAATCTTCACTCAAACTATACAGTCTAGTATTGTTGCTTCCCTTGAAGTCTTTCCTAAATTTTGTTACTGTTTCTGGTGGGGCCTTCAAAACTTAAGTACACTTGGTCAGGGTCTTCAAACCAGCACCTACCCTCTAGAGGTTTGGTTTTCCATAGTAATATGTATTTTGGGGCTTGTCCTGTTCGCTCTTCTGATTGGAAACATGCAGACTTACCTTCAATCAATGTCAGTTCGTCTTGAAGAAATGAGGATCAAAAGACGTGACTCCGAGCTATGGATGCATCATCGCTTGCTTCCCGCAGAGCTAAAAGAAAGAGTGAGACGCTACGACCAATACAAATGGCTGAACACCCGAGGTGTAGATGAAGAGAACTTGGTTCAGAGTCTTCCTAAAGATCTCAGGAGAGATATCAAACGGCATCTTTGTTTGAATTTGGTCAGAAGGGTTCCTCTCTTTGCTAACATGGACGAACGCTTGCTTGACGCTATATGTGAGAGACTGAAACCAAGTTTGTATACAGAGGGCACTTACATAGTTAGGGAAGGAGACCCTGTTAATGAGATGCTCTTCATAATACGCGGTCGCCTGGAGAGTGTCACAACAGATGGTGGAAGGAGTGGATTCTTCAACAGAGGTCTCCTCAAAGAAAATGACTTCTGTGGAGAGGAGCTGCTAACATGGGCGCTGGACCCGAAATCTGCTGCAAACTTGCCATCATCAACAAGGACAGTGAAGGCCATAAATGAGGTGGAGGCATTTGCATTGGAAGCTGAAGGAGCTGAAGTTCAGCACACATTCAGGTTCTACTCACAGCAGTGGAGAACATGGGCTGCTATATACATTCAAGCTGCATGGAGGAGGCATACCAGGAGGAAAGTTGCTGAGAAGAGAAGGAAAGAGGATGAAGCGTTTTATGAGTCTGATTATGAAGGAGGTGATGATGATGATGATGCAAGGGCATTGGTTAAACGTACTGGGAGTTCTTCATCTTCTAGCTTTGGAGCAACCATGTATGCTTCACGGTTTGCTGCTAGTGTACTTCGCAGTCATAGGCTTCGAGTTTCAAGTTTCAATGATCTGGAGAAGCCACAAAAGCCCCCAGAACCTGACTTCAGTGCTTATGGTCCACAGTGA 2130 0.4315 MSTSTSGGMKNKLSSILDFLPLSGRGRKNPSKSFRLGVMRGSDGLKTFGRSLKTGVTTWAVFPEDLKVSEKKVLDPQDRILLYWNKFFEILCIFSIACDPFFFYLPYFDHNSFCLAIDNNLAGFTVTLRTILDAIYLLRISFQFRTAYIAPSSRVFGRGELVIDPAKIASRYLQRYFIVDFISVLPMPQIIVWRYLHSSSHAEVLGTKTALLRVVILQYFPRFVRFLPLASEVKKTAGVFSENALLGATYYLIWYMLASHIIGSVWYLLAIERNDTCWRQACSEVEGCSTHFLYCGNSNNDLPGYGNWRNMSENVLRSRCFVSDDNPPFNYGIFTQTIQSSIVASLEVFPKFCYCFWWGLQNLSTLGQGLQTSTYPLEVWFSIVICILGLVLFALLIGNMQTYLQSMSVRLEEMRIKRRDSELWMHHRLLPAELKERVRRYDQYKWLNTRGVDEENLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTEGTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKENDFCGEELLTWALDPKSAANLPSSTRTVKAINEVEAFALEAEGAEVQHTFRFYSQQWRTWAAIYIQAAWRRHTRRKVAEKRRKEDEAFYESDYEGGDDDDDARALVKRTGSSSSSSFGATMYASRFAASVLRSHRLRVSSFNDLEKPQKPPEPDFSAYGPQ* 710
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2421 709 Gene3D - 85 408 - -
Dod06g2421 709 SUPERFAMILY cAMP-binding domain-like 413 590 IPR018490 -
Dod06g2421 709 Gene3D Jelly Rolls 481 598 IPR014710 -
Dod06g2421 709 SMART cnmp_10 483 613 IPR000595 -
Dod06g2421 709 Pfam Ion transport protein 83 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod06g2421 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 15 706 - -
Dod06g2421 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 15 706 - -
Dod06g2421 709 Pfam Cyclic nucleotide-binding domain 504 589 IPR000595 -
Dod06g2421 709 Gene3D Helix hairpin bin 410 474 - -
Dod06g2421 709 SUPERFAMILY Voltage-gated potassium channels 75 405 - -
Dod06g2421 709 CDD CAP_ED 483 590 IPR000595 -
Dod06g2421 709 MobiDBLite consensus disorder prediction 689 709 - -
Dod06g2421 709 ProSiteProfiles IQ motif profile. 606 635 IPR000048 GO:0005515
Dod06g2421 709 ProSiteProfiles cAMP/cGMP binding motif profile. 483 566 IPR000595 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod06g2421 Dod-Chr6 52806776 52812084 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2421 2 705 Ion Channels AT1G15990 65.427 0.0 922
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2421 K05391 - gmx:100810453 1138.25