Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2409 ATGATGAGACGCTGTGATCTGCCGGCACGTGACCTTCGCTTGCTGGATCCTCTTTTTGTCTATCCCTCAACAATCCTTGGAAGGGAAAAGGCTATTGTTGTTAACCTTGAACAGATAAGGTGTATCATTACAGCTGATGAGGTTCTTCTCCTGCATTCGCTGGACAGTTATGTGTTGCATTATGTGATGGAACTACAACGGCGATTAACAACACCTGGAGGAGAGGTGTGGCAGTCAGACAGTTCTGACATGAGCCGGAGGAGAGGAAGTAGGAATTTCGATGATGGCTTTGGCAGCACATCCCCTGATTATTTGCCTTTCGAGTTCAGGGCTCTTGAAGTTGCATTGGAGTCGGCATGCACATTTCTTGACTCTCAGGCAGTAGAGTTAGAAATTGAGGCTTATCCATTGTTGGATGAGCTAACATCTAAGATCAGTACTCTGAATTTGGAACGAGCTCGTCGGCTGAAAAGCAGGCTTGTTGCCCTGACTAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGACGAATGGAATCGGCATTCTATGGAGATCAGTCTTTGGTCGGATACAAATCAACTGATGGTGTATCCATATCTGCTCCAGTTTCCCCAGTTTCATCGCCTCATGATTCTCGGAAGCTTCAGAAAAGCATGAGCATCACTAGGAGTCGACATGAGAGCATGAGGAGTTCTGAAAGTACTACAGAAAGTATAGAAGAGCTTGAGATGTTGCTAGAAGCATACTTTGTAGTAATTGACAGCACCCTAAACAAGTTAACATCGTTGAAAGAGTACATTGATGACACAGAAGATTTCATTAACATTCAACTGGACAATGTGCGTAATCAGCTCATCCAGTTTGAGCTTTTACTCACAACTGCAACATTTGTTGTTGCCATCTTTGGTGTTATAGCAGGAATATTTGGGATGAATTTTGAAATTCCATTATTTGATGTCCCCTCAGCATTCCAGTGGGTTCTTATAATCACAGGTGTTTGTGGAGTCTTCATATTTTGTGCCTTTGTGTGGTTCTTCAGGTACAGAAGAATCATGCCCCTTTAG 1119 0.4307 MMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLHSLDSYVLHYVMELQRRLTTPGGEVWQSDSSDMSRRRGSRNFDDGFGSTSPDYLPFEFRALEVALESACTFLDSQAVELEIEAYPLLDELTSKISTLNLERARRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMESAFYGDQSLVGYKSTDGVSISAPVSPVSSPHDSRKLQKSMSITRSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVIAGIFGMNFEIPLFDVPSAFQWVLIITGVCGVFIFCAFVWFFRYRRIMPL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2409 372 Coils Coil 153 180 - -
Dod06g2409 372 Gene3D - 1 53 - -
Dod06g2409 372 MobiDBLite consensus disorder prediction 234 252 - -
Dod06g2409 372 PANTHER MAGNESIUM TRANSPORTER MRS2-B-RELATED 1 372 - -
Dod06g2409 372 MobiDBLite consensus disorder prediction 219 252 - -
Dod06g2409 372 CDD Mrs2_Mfm1p-like 1 369 IPR039204 -
Dod06g2409 372 Gene3D Magnesium transport protein CorA, transmembrane region 58 303 - -
Dod06g2409 372 Gene3D Magnesium transport protein CorA, transmembrane region 310 369 - -
Dod06g2409 372 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 372 IPR039204 -
Dod06g2409 372 MobiDBLite consensus disorder prediction 219 233 - -
Dod06g2409 372 Pfam CorA-like Mg2+ transporter protein 260 363 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Dod06g2409 372 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 309 362 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2409 Dod-Chr6 52677258 52679255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2409 1 372 MRS2 Gene Family AT1G16010 84.718 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2409 K16075 - gmx:100779803 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2409 06 52677258 52679255 Dod06g2409 06 52677258 52679255 ECH