Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2406 ATGGGGATATACCTGAGCACGCCGAAAACAGAGAAAGCCTCTGAAGATGGTGAGAATGAAAGGCTTCGCTACGGTCTGTCTTCCATGCAGGGGTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTCATCTATATTTGGACGAGTCTACCTCTTTCTTTGGTGTTTATGATGGCCATGGAGGCAAAGCAGTATCAAAATTCTGTGCCAAGTATCTACACCAGCAGGTGCTTAAGCATGAAGCTTACTCAGCTGGAGATATAGGCACATCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAAAATCGAAAAGTTGTCTGGTATGCTAGAGGGGTTTATATGGTCTCCCAGGAGTGGTGAAACCAATGACCGTGGTGATGACTGGGCTTTTGAGGAGGGACCCCATTCTGATTTCAGTGGACCAAACTCTGGAAGTACAGCTTGTGTGGCTGTCATTCGAGGAAACAAACTTGTTGTCGCAAATGCTGGTGATTCTAGATGTGTATTGTCAAGGAAGGGTCAGGCACACAATTTGTCTAAAGATCACAAGCCTGACCTTGAGGTTGAAAGAGACAGGATTCTAAAAGCTGGTGGTTTCATCCAAGTTGGACGCGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGACATAGAATTCAAGCAGAACAAGTTTTTGCCAGCTGATAAACAGATTGTGACTGCTGATCCGGACATAACTTCCGTTGAGTTTTGCGATGATGATGAGTTTCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCAAGCCAACAGCTTGTAGACTTCATACATGGACAGTTAAAGACAGAGAATAAACTTTCTGCAGTGTGTGAGAAAGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTAAAAAATCCTTCGGATTCAAGTTCTTCTTCCACGTACCAGCCTCAATTATCTGCTGAACCATCTGAATCTGATACAAGTTCCGAGATAGCAGAATAA 1080 0.4407 MGIYLSTPKTEKASEDGENERLRYGLSSMQGWRASMEDAHAAHLYLDESTSFFGVYDGHGGKAVSKFCAKYLHQQVLKHEAYSAGDIGTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSGETNDRGDDWAFEEGPHSDFSGPNSGSTACVAVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVERDRILKAGGFIQVGRVNGSLNLARAIGDIEFKQNKFLPADKQIVTADPDITSVEFCDDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQLKNPSDSSSSSTYQPQLSAEPSESDTSSEIAE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2406 359 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Dod06g2406 359 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 340 - -
Dod06g2406 359 Gene3D - 1 329 IPR036457 -
Dod06g2406 359 MobiDBLite consensus disorder prediction 330 359 - -
Dod06g2406 359 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Dod06g2406 359 PANTHER PROTEIN PHOSPHATASE 2C 1 340 IPR015655 GO:0004722|GO:0006470
Dod06g2406 359 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Dod06g2406 359 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Dod06g2406 359 CDD PP2Cc 23 328 IPR001932 -
Dod06g2406 359 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Dod06g2406 359 SMART PP2C_4 13 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2406 Dod-Chr6 52650950 52659827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2406 1 336 PP2C-type Phosphatase Gene Family AT2G25070 75.668 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2406 K17499 - gmx:100776787 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2406 06 52650950 52659827 Dod06g2406 06 52650950 52659827 ECH