Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2404 ATGATCATAAAGGTGAGAGAGTCGACATTGGTGCGTCCGGCGGAGGACGCGGCGGCGGCTGCGGGGCGCCGGACGGTGTGGAACTCGAACGTGGACTTGGTGGTCCCGAACTTCCACACGCCGAGCGTGTACTTCTACAGGCCGAACGGGGCGTCGAACTTCTTCGAGGCGAAGGTGATGAAGGAGGCGCTGAGCAAAGTGCTGGTGCCGTTTTACCCGATGGCAGGGAGACTGCGACGCGACGAGGATGGGCGCGTGGAGATCGATTGCGGCGGGCAAGGGGTGCTGTTCGTGGAGGCGGAGACCGGCGGAGTCATCGACGATTTCGGAGACTTCGCGCCCACGCTTGAGCTCCGCCAGCTCATCCCAGCCGTCGATTACTCCAAAGGAATCGAATCTTATCCCCTCTTGGTCCTCCAGGTAACATATTTCAAATGTGGAGGGGTGTCACTAGGAGTTGGCATGCAACATCATGCAGCAGATGGAGCTTCTGGTCTCCACTTCATCAACACATGGTCAGATGTAGCTCGTGGCCTTGATGTTTCTATCCCTCCATTCATTGACCGGACACTGCTAAGGGCCAGAGACCCTCCAAGACCTGTTTTTGATCACATTGAATACAAGCCCCCACCATCCATGAAGACTCCCTTGCCACCCTCAAAACCAGGATCAGACACTGCCGCAGAGGTCTCAATTTTCAAGCTGACCCGTGACCAGCTCAATATGTTGAAAGCAAAGTCCAAAGAAGATGGCAACACTGTCAGCTACAGCTCTTATGAGATGCTTGCTGGTCATGTTTGGAGGAGTGTGTGCAAGGCAAGAGGACTCCCTGATGATCAAGGCACCAAGTTGTACATTGCAACTGATGGAAGGTCAAGGTTGCAACCCCCTCTCCCACCAGGTTACTTTGGCAATGTGATCTTCACAACCACACCTATTGCTGTGGCTGGTGACCTCATGTCAAAGCCAACTTGGTATGCTGCAAGCAGGATCCACAATGCCTTGTTGAGGATGGACAATGAGTATTTGAGATCTGCCCTTGATTACTTAGAGCTGCAGCCTGATCTAAAAGCACTTGTTCGAGGGGCACACACTTTCAAGTGTCCAAATCTTGGCATCACTAGCTGGGCTAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCTATATTCATGGGACCTGGTGGGATTGCATATGAAGGGCTATCTTTCATAATTCCAAGCTCAACAAATGATGGTAGCTTGTCTGTGGCAATAGCTCTTCAGCCTGAGCACATGAAAGTGTTCAAGGAATTGTTCTATGACTTTTGA 1317 0.5216 MIIKVRESTLVRPAEDAAAAAGRRTVWNSNVDLVVPNFHTPSVYFYRPNGASNFFEAKVMKEALSKVLVPFYPMAGRLRRDEDGRVEIDCGGQGVLFVEAETGGVIDDFGDFAPTLELRQLIPAVDYSKGIESYPLLVLQVTYFKCGGVSLGVGMQHHAADGASGLHFINTWSDVARGLDVSIPPFIDRTLLRARDPPRPVFDHIEYKPPPSMKTPLPPSKPGSDTAAEVSIFKLTRDQLNMLKAKSKEDGNTVSYSSYEMLAGHVWRSVCKARGLPDDQGTKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALLRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALQPEHMKVFKELFYDF* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2404 438 Gene3D - 1 209 IPR023213 -
Dod06g2404 438 Pfam Transferase family 3 436 - -
Dod06g2404 438 MobiDBLite consensus disorder prediction 202 223 - -
Dod06g2404 438 Gene3D - 221 438 IPR023213 -
Dod06g2404 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 437 - -
Dod06g2404 438 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2404 Dod-Chr6 52605801 52612439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2404 1 437 Monolignol Biosynthesis Gene Families AT5G48930 78.490 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2404 K13065 - gmx:100820075 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2404 06 52605801 52612439 Dod06g2404 06 52605801 52612439 ECH
Dod10g2182 10 43676690 43681443 Dod06g2404 06 52605801 52612439 PCT