Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2389 ATGAAGGTGAAGGAGAAGGCTTGCGAGCTCTGCAACGAACAAGCTGCGCTGTACTGCGCCTCCGACTCTGCCTTCCTCTGCTGGAAATGCGATGCCGCCGTTCACCACGCCAACTTCCTCGTCGCTCGCCACCGTCGCCACCTCCTCTGCTCGGGTTGCAACCGCTTCGCCGGAATCAGTTTCTCCGGCGCCAAACCTCGCCTACAAGGCGGCGCCGCCCCTACCTGCCGCTCCTGCTGCGACGACGCCGGTTCACTCTCTTCTCCCCCCTCTTCTTCCTCATCCGCCTGCGTTTCGAGCTCCGAGCCGCCACGCGGTACAGCCACAGAGAAAACGAAGGCAAAAACAAAAACAAAAACGAAGAGAATCAGAACGAGGAGCTGTTCGAGCTCCGTAACCGACGACGAAGAAGCGTCTTGTTCTGCGGCGAAGCGAAAGAGAAGGGAAAACGGTGATGGATCTGGTGAGGCTGTTGTTGTGGCGGCGGCGGCGGAGGAGGAGGAGGAAGAGGTGTTTGTGAAATGGAGCGAGGACTTAGGGTTAGGGTTAGACGACGGGAATCGCGTGGTGTCGTTGGCTTCGAAGGCGTTGAGGCTGTGCCTGGAGAGGTGGAAGAGCGTTGTTCCGTTCAAGGTGGCTGCTGCGACGTCGTTTTGGTTGGGTCTCAGATTTTGTGGGATCAGTTGTCTCTCCACGTTTCAGAATCTCTGGAAATTGGAGGTGATCTCAGGTGTGCCAGCTAAGCTCATCCTCACCGCACACGCAAAGCTCGCGCGTGTCTTCTACCAACGGAGGTTGGTCCATTCGCAAGAACAAGAACAAGAGCAAGAAGAAGGATGCGATGAATCCTAA 852 0.5692 MKVKEKACELCNEQAALYCASDSAFLCWKCDAAVHHANFLVARHRRHLLCSGCNRFAGISFSGAKPRLQGGAAPTCRSCCDDAGSLSSPPSSSSSACVSSSEPPRGTATEKTKAKTKTKTKRIRTRSCSSSVTDDEEASCSAAKRKRRENGDGSGEAVVVAAAAEEEEEEVFVKWSEDLGLGLDDGNRVVSLASKALRLCLERWKSVVPFKVAAATSFWLGLRFCGISCLSTFQNLWKLEVISGVPAKLILTAHAKLARVFYQRRLVHSQEQEQEQEEGCDES* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2389 283 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 5 262 - -
Dod06g2389 283 ProSiteProfiles Zinc finger B-box type profile. 3 49 IPR000315 GO:0008270
Dod06g2389 283 MobiDBLite consensus disorder prediction 87 107 - -
Dod06g2389 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 262 - -
Dod06g2389 283 SMART bboxneu5 3 49 IPR000315 GO:0008270
Dod06g2389 283 Pfam B-box zinc finger 4 46 IPR000315 GO:0008270
Dod06g2389 283 CDD Bbox1_BBX-like 7 49 - -
Dod06g2389 283 MobiDBLite consensus disorder prediction 87 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2389 Dod-Chr6 52427811 52428662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2389 8 278 C2C2-CO-like Transcription Factor Family AT3G21150 31.387 1.05e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod06g2389 zf-B_box 2.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2389 - - adu:107463828 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2389 06 52427811 52428662 Dod06g2389 06 52427811 52428662 ECH