Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2381 ATGACCAACGGCCTCCTCACCGTAACCGTCGACAGCAGGCACCCTGATGACGGCGCCGATGACCACCATGACGCTCCTCCTCCTGCTCCTTTTGCCTCCAACAACAAAAATAATAATCTCAATGATGATGAAGACAATGATGAATTCCCCGATCCAAATGATCCTTTCGACATTCAGCATACCAAGCATGCTCCCGTCGAGACGCTCCGCCGTTGGAGACAAGCAGCACTCGTGCTCAATGCCTCCAGGCGTTTTAGATATACCCTGGACCTGAAGAAAGAAGAGGAGAAAGATCAGAAAAAACGCTTGATTAGAGCTCATGCACAAGTCATAAGGGCAGCGTTGCTTTTCAAATTGGCCGGTGAACGTGAACTAGTGGTAAGTGCGGCACCGAGTCCTGCACATCCAGTTGGTGACTATGGAATTGGGCTCGAGCAACTAGTTTCAATGTCTAAGGATCAGAATGTTTCTGCTTTAGAACAATATGGAGGGATTAAGGGCTTATCAAATTTACTGAAATCAAATCCCAACAAAGGAATTAGTGGAGATGATTCTGATATAGTAAAAAGGAAAAATGCATATGGAACTAATACATATCCGCGGAAAAAAGGAAGAAGTTTCTGGAGGTTTTTATGGGAGTCCTGGCAAGATCTGACTCTTATAATATTGATTGTAGCAGCTGCTGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGTCAGAAGGATGGTATGATGGGGGAAGCATCTTTTTTGCAGTTTTTCTTGTCATTGTAGTTACAGCTGTCAGTGACTATCGGCAATCTCTTCAGTTTCAGAATTTGAATGCAGAAAAACAAAATATACAATTGGAGGTCATTAGAGGTGGCAGAACAATTAAATTATCAATATTTGATATTGTTGTTGGTGATGTAGTACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAGTCACTGGTCATTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCACAAGGATCACAAAACACCCTTTTTGATGTCTGGCTGCAAAGTAGCTGATGGAGTTGGTGTTATGCTGGTAACTGGTGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGAGAGGAGACTCCGTTACAGGTACGTTTGAATGGGGTAGCAACTTTTATTGGTGTAGTTGGACTTACTGTAGCTGTTTTAGTGCTTGCAGTCCTCTTGGGCAGATACTTTTCTGGCAATAGCAAAGATCTAAATGGAAACGTGCAATTTGTTGGTGGAAAGACTAGTCTTAGTGATGCAGTCGATGGGGTCATCAAAATTTTTACCATTGCAGTCACCATTGTGGTTGTTGCGGTGCCTGAAGGTCTCCCTTTGGCAGTTACACTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAAGCATTGGTACGAAGGTTGTCATCCTGTGAAACTATGGGCTCTGCTACCACAATCTGCAGTGATAAGACTGGAACATTGACCTTAAATCAGATGACTGTAGTTGAGGCATACGTTGGGAGTAAGAAACTAAATCCACCAGCCGACTCATCAAAGTTGAATTCAGAAGTTTTATCTCTGATAAATGAGGGCATTGCACAGAATACAACTGGAAATGTTTTTGTGCCCAAGGATGGGGGAAAGGCAGAGGTGTCAGGATCTCCAACAGAGAAGGCAATTCTTTCATGGGCAGTTGAGTTGGGTATGAATTTTGATCTTATCAGATCAAATACGACAGTTCTCCATGTCCTACCATTTAACTCTGAGAAAAAGCGAGGCGGTGTTGCTCTGAAACAGGAGAACTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAGATACTTCTTGGAGCATGTACACAGTATCTTGATTCAGATGGTCAATTGAAATCCATTGGAGAGAAGGAATTTTTCAACAAGGCTATTGATGATATGGCTGCTCAGAGATTGCGTTGTGTTGCCATTGCATACAGAACATATGAATTAGACAAAGTTCCATCAAATGAGGAGGATTTGGACCAATGGTCCTTACCAGAACATGATCTTGTTTTGCTTGCTATTGTTGGGATAAAGGATCCTTGTCGCGATGGTGTAAAAAATGCAGTGAAACTATGCACTGAAGCTGGAGTTAAGGTACGCATGGTTACTGGAGACAACCTTCAGACAGCAAAGGCAATAGCTTTGGAGTGTGGGATACTGGCTTCAAATGAAGATGCTGTTGATCCAATTATAATTGAAGGAAAGAAATTCCGTGAACTATCAGAAAAAGAGAGGGAGCAGATTGCTAAGCAAATAACAGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCTCTACGTAAAGGAGGTGACGTTGTTGCTGTCACAGGAGATGGAACAAATGATGCCCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTGGATGATGACTTTGCATCAGTAGTGAAGGTTGTCCGCTGGGGCCGCTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTCCAGCTTACTGTTAATGTTGCTGCACTTGTAATAAACGTTGTGGCAGCAATATCTTCTGGTGGTGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACGCTTGGAGCCCTTGCACTGGCTACTGAACCACCAACAGACAGCCTTATGCACAGATCACCAGTTGGCCGAAGGGAACCTCTTATAACAAATGTCATGTGGAGAAACTTGCTTGTACAGGCTATCTATCAAGTCACTGTTCTTCTCGTTCTTAACTTCTGCGGTGAAAGTATTCTACCTAAACAAAACACTCAAGCCCGTACCATTCGAGTGAAGAATACTTTAATATTCAATGCTTTCGTCCTGTGTCAAATATTCAATGAGTTCAATGCTCGGAAACCAGAAGAAAAGAATGTATTCCAAGGGGTGACTAAGAACCGTCTTTTCATGGGAATTGTTGGAGTGACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCACCTCAACAGTGCGGCTTGATTGGAAACTTTGGCTTACTTCTCTTGTTATTGCCGTTGTCAGCTGGCCTCTTGCCCTTGTTGGAAAATTCATTCCTGTTCCCAAAACACCATTGTCCCGATACTTCACAAAGCCACTTAGGCGATGGAGGAGGTCTCGTTCTGCACAATAG 3294 0.4281 MTNGLLTVTVDSRHPDDGADDHHDAPPPAPFASNNKNNNLNDDEDNDEFPDPNDPFDIQHTKHAPVETLRRWRQAALVLNASRRFRYTLDLKKEEEKDQKKRLIRAHAQVIRAALLFKLAGERELVVSAAPSPAHPVGDYGIGLEQLVSMSKDQNVSALEQYGGIKGLSNLLKSNPNKGISGDDSDIVKRKNAYGTNTYPRKKGRSFWRFLWESWQDLTLIILIVAAAVSLALGIKTEGLSEGWYDGGSIFFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKLSIFDIVVGDVVPLKIGDQVPADGVLVTGHSLAIDESSMTGESKIVHKDHKTPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLTVAVLVLAVLLGRYFSGNSKDLNGNVQFVGGKTSLSDAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSSCETMGSATTICSDKTGTLTLNQMTVVEAYVGSKKLNPPADSSKLNSEVLSLINEGIAQNTTGNVFVPKDGGKAEVSGSPTEKAILSWAVELGMNFDLIRSNTTVLHVLPFNSEKKRGGVALKQENSGVHIHWKGAAEILLGACTQYLDSDGQLKSIGEKEFFNKAIDDMAAQRLRCVAIAYRTYELDKVPSNEEDLDQWSLPEHDLVLLAIVGIKDPCRDGVKNAVKLCTEAGVKVRMVTGDNLQTAKAIALECGILASNEDAVDPIIIEGKKFRELSEKEREQIAKQITVMGRSSPNDKLLLVQALRKGGDVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDDFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGGVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMHRSPVGRREPLITNVMWRNLLVQAIYQVTVLLVLNFCGESILPKQNTQARTIRVKNTLIFNAFVLCQIFNEFNARKPEEKNVFQGVTKNRLFMGIVGVTFILQIIIIEFLGKFTSTVRLDWKLWLTSLVIAVVSWPLALVGKFIPVPKTPLSRYFTKPLRRWRRSRSAQ* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2381 1097 SUPERFAMILY Calcium ATPase, transmembrane domain M 162 1074 IPR023298 -
Dod06g2381 1097 Gene3D - 65 119 - -
Dod06g2381 1097 Gene3D - 502 856 IPR023214 -
Dod06g2381 1097 PRINTS P-type cation-transporting ATPase superfamily signature 704 715 - -
Dod06g2381 1097 PRINTS P-type cation-transporting ATPase superfamily signature 505 519 - -
Dod06g2381 1097 PRINTS P-type cation-transporting ATPase superfamily signature 726 736 - -
Dod06g2381 1097 PRINTS P-type cation-transporting ATPase superfamily signature 835 847 - -
Dod06g2381 1097 PRINTS P-type cation-transporting ATPase superfamily signature 811 830 - -
Dod06g2381 1097 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Dod06g2381 1097 Gene3D - 515 711 IPR023299 GO:0000166
Dod06g2381 1097 ProSitePatterns E1-E2 ATPases phosphorylation site. 507 513 IPR018303 -
Dod06g2381 1097 Pfam haloacid dehalogenase-like hydrolase 502 825 - -
Dod06g2381 1097 PRINTS Sodium/potassium-transporting ATPase signature 248 268 - -
Dod06g2381 1097 PRINTS Sodium/potassium-transporting ATPase signature 624 642 - -
Dod06g2381 1097 PRINTS Sodium/potassium-transporting ATPase signature 498 519 - -
Dod06g2381 1097 Pfam Ca2+-ATPase N terminal autoinhibitory domain 53 96 IPR024750 GO:0005516
Dod06g2381 1097 PANTHER CALCIUM-TRANSPORTING ATPASE 51 1089 - -
Dod06g2381 1097 SUPERFAMILY Calcium ATPase, transduction domain A 283 378 IPR008250 -
Dod06g2381 1097 SMART Cation_ATPase_N_a_2 161 235 IPR004014 -
Dod06g2381 1097 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 777 892 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2381 1097 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 445 530 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod06g2381 1097 Pfam Cation transporter/ATPase, N-terminus 162 230 IPR004014 -
Dod06g2381 1097 PANTHER CATION TRANSPORTING ATPASE 51 1089 - -
Dod06g2381 1097 SFLD p-type atpase 487 863 IPR044492 -
Dod06g2381 1097 SUPERFAMILY HAD-like 503 916 IPR036412 -
Dod06g2381 1097 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 151 1074 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Dod06g2381 1097 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 512 708 IPR023299 GO:0000166
Dod06g2381 1097 Pfam Cation transporting ATPase, C-terminus 896 1072 IPR006068 -
Dod06g2381 1097 Gene3D - 185 381 - -
Dod06g2381 1097 Gene3D - 213 1066 - -
Dod06g2381 1097 MobiDBLite consensus disorder prediction 1 59 - -
Dod06g2381 1097 Pfam E1-E2 ATPase 282 483 - -
Dod06g2381 1097 CDD P-type_ATPase_Ca_PMCA-like 189 944 - -
Dod06g2381 1097 SFLD Haloacid Dehalogenase 487 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2381 Dod-Chr6 52309483 52336293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2381 2 1096 Primary Pumps ATPases AT3G21180 73.929 0.0 1632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2381 K01537 - gmx:100777143 1770.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2381 06 52309483 52336293 Dod06g2381 06 52309483 52336293 ECH