Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2376 ATGGATTTGGAAGCTCAACCGGAGACTGTTGATGAAAGTTCTGCTGAGAAAACATCAGCACCATGTGAAGGCAGTTCAATCATGGAACCATATGTTGGTATGGAGTTCGATTCTGAAGCTGATGCCAAGAATTTTTATGATGAATACGCAAGACGTGAAGGGTTCATTGTCCGCCTTGATCGCTGTCATCGTTCCGAGGTTGACAACAGGATTATCTCTCGCCGTATTTCATGCAATAAGCAAGGTTTTCATGTGAGAGGAAAATATGAAGTCAACCCTCTTCGGAAACCACGAGTTAGCATAAGAGAAGGCTGTGAGGCAATGATCTTGGTTAAAGTTAACAAAAGTGGGAAGTGGGTTATTACTAAATTTATAAAGGAACATAGTCATCCACTGATGGGTTCTTCTGGTGTTCGTTCTTATCGTACAACGCAATCAAAGGATAGGAAGATTCGGGAACTCATGAAGGAACTTGAGCGTCGAGATCAACTATGTCAACAATACCGCAGGCTGCTACTTTCCCTTATGGAAACTGTTGAGGAGCAAAGAGAATTTTTATCAACAAAAGTTGAACATGTTGTTAACAGTGTCAAACAACTTGAGAATGATGTGCAAAAACCTTTGGACACTAGCTAG 636 0.4119 MDLEAQPETVDESSAEKTSAPCEGSSIMEPYVGMEFDSEADAKNFYDEYARREGFIVRLDRCHRSEVDNRIISRRISCNKQGFHVRGKYEVNPLRKPRVSIREGCEAMILVKVNKSGKWVITKFIKEHSHPLMGSSGVRSYRTTQSKDRKIRELMKELERRDQLCQQYRRLLLSLMETVEEQREFLSTKVEHVVNSVKQLENDVQKPLDTS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2376 211 Pfam FAR1 DNA-binding domain 44 133 IPR004330 -
Dod06g2376 211 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 208 - -
Dod06g2376 211 Coils Coil 151 171 - -
Dod06g2376 211 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 2 208 - -
Dod06g2376 211 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2376 Dod-Chr6 52270494 52277841 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dod06g2376 FAR1 5.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2376 - - pvu:PHAVU_010G032600g 274.248