Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2325 ATGATCCCTTCTTTTCTTTTCCAGGAGTCAGTTCGTAGAGGGGAGGTAGTAAATTTGGTAACTGTTCTGGGCTATCTGAGAAGAATGAAAACTTTCTCCTCAATTCGTCCACGCCAGCATTTCCCAGTCACAAGATTTTACACTTCCACCACCACAAGATTTTACATCAGGACTCAACTCTCTTTTCCTGCAAAAGCCTTCTCTTGCCAGGCAAAATGTGGCACAGATGGGTCATTAAACTTGAGAGTGATGCCTCCCACTCTGTTAGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGACTTTGTTTCTGAGAAAACAAGGCTTGAGCAATGTTGTTGCTGCAAGGACCATCAACAAGTCAGATCTTTTTATCGACCACCTTGTCTCAGTGCTTCACTCTAAACACAAATCTCGGTACCTCGTAGGGAGAGAGCTTACAACTCTGGAGATCAGGGATGCACTTATCCCATACCTTGAATCCCTTCTAGAAGAGCATGGAGACACTCTAGTGGATGTAGTGGAAAGCTATCCAATCCCACCTGTTAAGGACAAATCAGCTGTGCAGATTTCTCCTCCTTGTCCAACAGTAGACTCTAAGAAGCTTAAGGCCGTGTCTAGAGTGAGTGAGATGGACCCAACAGCTGGCAATCTTCGCCCTCATATTGTCTATCTCATGGAGCTCGGTATGAATATTGAGCAGATCAAGAGTATTACACGACGATTCCCATCTTTTGCCTACTACAGCTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTCTTTCTTGAACTTGGAGTGCCAAAAGAAGACATTCCCACCATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGTCTATCAGGAAATCTTAAACCCACCATGAAGTTTTTAGAATCTTTGGGTGTTGACAAGAAACAATGGGCAAAGGTGATCTACCGCTTCCCAGCCCTTCTAACTTATAGCAGGCAGAAGGTGAGGGAGATCGTAGATTTTCTCTCTGAATTGGGGCTCTCTGAAGACAACATAGGTAAGATCTTAACTCGCTGCCCCAATATTGTTAGCTACAGTGTAGAGGACAATCTCCGACCAACCGCCAATTACTTCCATTCTTTGGGGGTGGATGTTGGCATTCTTCTATTCCGATGCCCACAGAATTTTGGTCTTAGCATTGAGGCCAATTTGAAGCCTGTAACAATTTTTTTCTTGGAGAAAGGATACACTTTGGAGGAAATTGGGACCATGATTTCAAGATATGGAGCCTTGTATACCTTTAGCTTGAATGAGAATTTGATTCCGAAATGGGATTTCTTCATGACCATGGGTTACCCGAAATCTGAGCTGGTTAAATTCCCTCAATTTTTCGGATACAGTTTGGAAGAAAGGATTAAACCAAGATATGCTCGGATGAAAAAATCCGGGGTAAGGTTACTGCTGAACCAGGTTCTATCCCTATCTAGCAGCAACTTTGAAAAGGCATTGGAAAAGAAAATGAAGAAAAATGCAGTTTGA 1509 0.4307 MIPSFLFQESVRRGEVVNLVTVLGYLRRMKTFSSIRPRQHFPVTRFYTSTTTRFYIRTQLSFPAKAFSCQAKCGTDGSLNLRVMPPTLLAAEKEEAKAVLTLFLRKQGLSNVVAARTINKSDLFIDHLVSVLHSKHKSRYLVGRELTTLEIRDALIPYLESLLEEHGDTLVDVVESYPIPPVKDKSAVQISPPCPTVDSKKLKAVSRVSEMDPTAGNLRPHIVYLMELGMNIEQIKSITRRFPSFAYYSLEGKIKPVVEFFLELGVPKEDIPTILTKRPQLCGISLSGNLKPTMKFLESLGVDKKQWAKVIYRFPALLTYSRQKVREIVDFLSELGLSEDNIGKILTRCPNIVSYSVEDNLRPTANYFHSLGVDVGILLFRCPQNFGLSIEANLKPVTIFFLEKGYTLEEIGTMISRYGALYTFSLNENLIPKWDFFMTMGYPKSELVKFPQFFGYSLEERIKPRYARMKKSGVRLLLNQVLSLSSSNFEKALEKKMKKNAV* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2325 502 Gene3D Transcription termination factor 3, mitochondrial 282 499 IPR038538 -
Dod06g2325 502 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 54 500 - -
Dod06g2325 502 PANTHER CGI-12 PROTEIN-RELATED 54 500 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 SMART mt_12 444 475 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 SMART mt_12 236 267 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 SMART mt_12 199 231 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 SMART mt_12 343 374 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 SMART mt_12 412 443 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 SMART mt_12 376 407 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 SMART mt_12 308 338 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 Pfam mTERF 327 490 IPR003690 GO:0003690|GO:0006355
Dod06g2325 502 Pfam mTERF 216 396 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod06g2325 mTERF 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2325 K15032 K12177 gmx:100781900 740.725